Variant report

Variant rs1571484
Chromosome Location chr9:535492-535493
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:528000-537400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr9:530800-538400 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr9:531200-538000 Enhancers Brain Anterior Caudate brain
4 chr9:531400-546400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr9:531600-535800 Enhancers Brain Angular Gyrus brain
6 chr9:532000-538600 Enhancers Fetal Muscle Leg muscle
7 chr9:532400-535600 Enhancers Fetal Intestine Large intestine
8 chr9:532400-538400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
9 chr9:532800-535600 Enhancers HUES48 Cell Line embryonic stem cell
10 chr9:532800-535600 Enhancers Duodenum Mucosa Duodenum
11 chr9:532800-538400 Enhancers Cortex derived primary cultured neurospheres brain
12 chr9:533000-535800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr9:533200-537000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr9:533400-536800 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr9:533400-537000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr9:533400-540000 Weak transcription A549 lung
17 chr9:533600-536000 Enhancers HMEC breast
18 chr9:534000-536000 Enhancers iPS-18 Cell Line embryonic stem cell
19 chr9:534400-535800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr9:534400-537000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr9:534600-535600 Flanking Active TSS Brain Hippocampus Middle brain
22 chr9:534600-535800 Genic enhancers NHEK skin
23 chr9:534600-536000 Enhancers Colon Smooth Muscle Colon
24 chr9:534800-535600 Enhancers HUES64 Cell Line embryonic stem cell
25 chr9:534800-535800 Enhancers Placenta Placenta
26 chr9:534800-535800 Enhancers Psoas Muscle Psoas
27 chr9:534800-535800 Enhancers Right Atrium heart
28 chr9:534800-536400 Enhancers Fetal Muscle Trunk muscle
29 chr9:534800-546200 Weak transcription Fetal Kidney kidney
30 chr9:535000-535600 Enhancers HUES6 Cell Line embryonic stem cell
31 chr9:535000-535600 Enhancers Ovary ovary
32 chr9:535000-535600 Enhancers Rectal Mucosa Donor 31 rectum
33 chr9:535000-535600 Enhancers Rectal Smooth Muscle rectum
34 chr9:535000-535800 Enhancers H1 Cell Line embryonic stem cell
35 chr9:535000-535800 Enhancers H9 Cell Line embryonic stem cell
36 chr9:535000-535800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
37 chr9:535000-535800 Enhancers Adipose Nuclei Adipose
38 chr9:535000-535800 Enhancers Duodenum Smooth Muscle Duodenum
39 chr9:535000-535800 Enhancers Gastric stomach
40 chr9:535000-535800 Enhancers Pancreas Pancrea
41 chr9:535000-535800 Enhancers Skeletal Muscle Female skeletal muscle
42 chr9:535000-535800 Enhancers Small Intestine intestine
43 chr9:535000-535800 Enhancers Spleen Spleen
44 chr9:535000-536000 Enhancers Primary B cells from peripheral blood blood
45 chr9:535000-536000 Enhancers Sigmoid Colon Sigmoid Colon
46 chr9:535000-536000 Enhancers Skeletal Muscle Male skeletal muscle
47 chr9:535000-537800 Enhancers Left Ventricle heart
48 chr9:535200-535600 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr9:535200-535600 Enhancers Aorta Aorta
50 chr9:535200-535600 Flanking Active TSS Brain Cingulate Gyrus brain

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