Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:168838430..168840241-chr1:168843317..168845791,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10753780	1.00[ASN][1000 genomes]
rs10753781	0.85[ASN][1000 genomes]
rs10800392	0.85[ASN][1000 genomes]
rs10800393	0.85[ASN][1000 genomes]
rs10919006	0.82[AFR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1885557	1.00[ASN][1000 genomes]
rs34298853	0.88[ASN][1000 genomes]
rs4656163	0.86[ASN][1000 genomes]
rs4656622	0.88[ASN][1000 genomes]
rs4656624	0.84[ASN][1000 genomes]
rs6427155	0.86[ASN][1000 genomes]
rs6666564	0.87[ASN][1000 genomes]
rs6683127	0.87[ASN][1000 genomes]
rs6683236	0.86[ASN][1000 genomes]
rs6683991	0.96[ASN][1000 genomes]
rs6694810	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6702913	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs715008	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7525262	0.99[ASN][1000 genomes]
rs7550083	0.88[ASN][1000 genomes]
rs857633	0.99[ASN][1000 genomes]
rs857635	0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869415	chr1:168467284-169153863	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
2	nsv831847	chr1:168669877-168850129	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv437258	chr1:168824111-168890420	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:168838800-168843200	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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