Variant report

Variant rs1580066
Chromosome Location chr4:99213426-99213427
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99184000-99239600 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr4:99184200-99242200 Weak transcription A549 lung
3 chr4:99185400-99239400 Weak transcription NHEK skin
4 chr4:99194000-99215400 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr4:99194600-99214600 Weak transcription Liver Liver
6 chr4:99196600-99214200 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr4:99197000-99214600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr4:99204800-99226600 Weak transcription Colon Smooth Muscle Colon
9 chr4:99205000-99215400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr4:99206000-99218600 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr4:99206000-99234800 Weak transcription Pancreas Pancrea
12 chr4:99206200-99214800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr4:99206200-99214800 Weak transcription Left Ventricle heart
14 chr4:99206200-99214800 Weak transcription Spleen Spleen
15 chr4:99206200-99214800 Weak transcription HSMM muscle
16 chr4:99206200-99215800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr4:99206200-99215800 Weak transcription HMEC breast
18 chr4:99206200-99218200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr4:99206200-99218200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr4:99206200-99229000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr4:99206200-99232800 Weak transcription Gastric stomach
22 chr4:99206200-99234000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr4:99206200-99239800 Weak transcription Aorta Aorta
24 chr4:99206400-99214600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr4:99206800-99214400 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr4:99206800-99214400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr4:99206800-99215400 Weak transcription NHDF-Ad bronchial
28 chr4:99206800-99216000 Weak transcription HUVEC blood vessel
29 chr4:99206800-99219000 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr4:99206800-99223600 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr4:99207600-99214800 Weak transcription Primary hematopoietic stem cells blood
32 chr4:99208800-99222800 Weak transcription Adipose Nuclei Adipose
33 chr4:99210200-99250800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr4:99210600-99214800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr4:99210600-99214800 Weak transcription Psoas Muscle Psoas
36 chr4:99210600-99218400 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr4:99210600-99219200 Weak transcription Small Intestine intestine
38 chr4:99210600-99220600 Weak transcription Right Ventricle heart
39 chr4:99210600-99222200 Weak transcription Fetal Intestine Small intestine
40 chr4:99210600-99222600 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr4:99210600-99223600 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr4:99210800-99215800 Weak transcription NH-A brain
43 chr4:99210800-99222800 Weak transcription Duodenum Mucosa Duodenum
44 chr4:99211000-99213600 Enhancers Brain Hippocampus Middle brain
45 chr4:99211200-99213600 Enhancers Brain Inferior Temporal Lobe brain
46 chr4:99211200-99214600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr4:99211200-99226600 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr4:99211400-99223400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr4:99211400-99226000 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr4:99211600-99216000 Weak transcription iPS-20b Cell Line embryonic stem cell

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