Variant report

Variant	rs1580817
Chromosome Location	chr3:25146601-25146602
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs13068891	1.00[ASW][hapmap];0.85[LWK][hapmap];1.00[YRI][hapmap]
rs1587428	0.83[EUR][1000 genomes]
rs1587429	0.87[EUR][1000 genomes]
rs1587430	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2036270	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2062487	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4444672	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4858698	0.87[EUR][1000 genomes]
rs4858702	0.87[EUR][1000 genomes]
rs4858703	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6550945	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6550948	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6766372	0.81[EUR][1000 genomes]
rs6775433	0.80[EUR][1000 genomes]
rs7430038	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9310770	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9809916	0.86[EUR][1000 genomes]
rs9831718	0.87[EUR][1000 genomes]
rs9882518	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:25144800-25147600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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