Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:117923883..117926723-chr8:117926921..117928752,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs14795	0.92[JPT][hapmap]
rs2241981	0.92[JPT][hapmap]
rs2241982	0.92[JPT][hapmap]
rs2921724	1.00[EUR][1000 genomes]
rs2921728	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2921737	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2921746	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2921749	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2921775	0.92[JPT][hapmap]
rs2921784	0.91[JPT][hapmap]
rs2921785	0.92[JPT][hapmap]
rs2921787	0.92[JPT][hapmap]
rs2921788	0.92[JPT][hapmap]
rs2921789	0.92[JPT][hapmap]
rs2921790	0.92[JPT][hapmap]
rs2921791	0.92[JPT][hapmap]
rs3020109	0.92[JPT][hapmap]
rs3020111	0.92[JPT][hapmap]
rs3020125	0.92[JPT][hapmap]
rs3020133	0.92[JPT][hapmap]
rs3020162	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3020169	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3020170	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3020172	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3020173	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3020174	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs3020181	0.92[JPT][hapmap]
rs6996153	0.85[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530386	chr8:117509968-118391406	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv831434	chr8:117784467-117977825	Flanking Active TSS Genic enhancers Weak transcription Enhancers Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:117928000-117929600	Enhancers	NHEK	skin

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