Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:98034269..98036713-chr5:98038711..98041425,2	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10067179	0.94[EUR][1000 genomes]
rs10515284	0.89[CEU][hapmap]
rs11956636	0.89[CEU][hapmap]
rs13361671	0.94[EUR][1000 genomes]
rs17166262	0.86[EUR][1000 genomes]
rs17166414	0.89[CEU][hapmap]
rs17166423	0.89[CEU][hapmap]
rs17166428	0.89[CEU][hapmap]
rs17663317	0.81[CEU][hapmap]
rs17821701	0.90[CEU][hapmap];0.89[AMR][1000 genomes]
rs2369266	0.94[EUR][1000 genomes]
rs3179904	0.89[CEU][hapmap]
rs55805636	0.82[EUR][1000 genomes]
rs56263742	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs57512238	0.89[AMR][1000 genomes]
rs6865482	0.89[AMR][1000 genomes]
rs6865814	0.94[AMR][1000 genomes]
rs6866527	0.90[CEU][hapmap]
rs6867815	0.94[EUR][1000 genomes]
rs6877710	0.94[EUR][1000 genomes]
rs6893282	0.89[CEU][hapmap]
rs727637	0.89[CEU][hapmap]
rs73149540	0.94[EUR][1000 genomes]
rs73149544	0.94[EUR][1000 genomes]
rs73773505	0.89[AMR][1000 genomes]
rs73773524	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7732391	0.86[EUR][1000 genomes]
rs7737398	0.89[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029509	chr5:97888644-98040172	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv1032060	chr5:98022226-98093492	Enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv537817	chr5:98022226-98093492	Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:98026000-98040000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr5:98036200-98037000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr5:98036200-98037000	Enhancers	NHDF-Ad	bronchial
4	chr5:98036400-98036800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr5:98036400-98037200	Enhancers	Osteobl	bone
6	chr5:98036600-98036800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr5:98036600-98037000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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