Variant report

Variant rs1616572
Chromosome Location chr9:6683701-6683702
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:6682400-6683800 Enhancers Primary T cells from cord blood blood
2 chr9:6682400-6683800 Enhancers Spleen Spleen
3 chr9:6682400-6684800 Enhancers Primary monocytes fromperipheralblood blood
4 chr9:6682400-6686400 Weak transcription Stomach Mucosa stomach
5 chr9:6682600-6683800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr9:6682600-6683800 Enhancers Pancreas Pancrea
7 chr9:6682600-6684400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr9:6682600-6684400 Weak transcription Fetal Kidney kidney
9 chr9:6682600-6686200 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr9:6682600-6686400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr9:6682600-6687200 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr9:6682600-6687600 Weak transcription Rectal Smooth Muscle rectum
13 chr9:6682600-6689600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr9:6682600-6689800 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr9:6682600-6691000 Weak transcription Esophagus oesophagus
16 chr9:6682600-6692000 Weak transcription Fetal Stomach stomach
17 chr9:6682600-6703200 Weak transcription Thymus Thymus
18 chr9:6682600-6703600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr9:6682800-6683800 Enhancers Liver Liver
20 chr9:6682800-6683800 Enhancers Fetal Intestine Small intestine
21 chr9:6682800-6684200 Weak transcription Primary hematopoietic stem cells blood
22 chr9:6682800-6684400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr9:6682800-6684400 Weak transcription NHLF lung
24 chr9:6682800-6684600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr9:6682800-6684600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr9:6682800-6686200 Weak transcription Brain Anterior Caudate brain
27 chr9:6682800-6686200 Weak transcription Brain Inferior Temporal Lobe brain
28 chr9:6682800-6688000 Weak transcription Stomach Smooth Muscle stomach
29 chr9:6682800-6689600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr9:6682800-6690600 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr9:6682800-6692400 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr9:6682800-6693200 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr9:6682800-6693200 Weak transcription Fetal Brain Male brain
34 chr9:6683000-6683800 Enhancers Primary T helper naive cells from peripheral blood blood
35 chr9:6683000-6683800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr9:6683000-6683800 Enhancers Fetal Heart heart
37 chr9:6683000-6683800 Genic enhancers NHEK skin
38 chr9:6683000-6684000 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr9:6683000-6684200 Enhancers Placenta Placenta
40 chr9:6683000-6684600 Weak transcription Brain Hippocampus Middle brain
41 chr9:6683000-6691400 Weak transcription Brain Cingulate Gyrus brain
42 chr9:6683000-6691800 Weak transcription H1 Cell Line embryonic stem cell
43 chr9:6683200-6683800 Genic enhancers HUES6 Cell Line embryonic stem cell
44 chr9:6683200-6683800 Genic enhancers iPS-20b Cell Line embryonic stem cell
45 chr9:6683200-6683800 Flanking Active TSS A549 lung
46 chr9:6683200-6683800 Transcr. at gene 5' and 3' HepG2 liver
47 chr9:6683200-6684000 Flanking Active TSS K562 blood
48 chr9:6683200-6684400 Weak transcription Fetal Muscle Trunk muscle
49 chr9:6683200-6688400 Weak transcription HMEC breast
50 chr9:6683400-6683800 Genic enhancers iPS-18 Cell Line embryonic stem cell

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