Variant report

Variant rs1621597
Chromosome Location chr15:42210393-42210394
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:42187200-42211800 Weak transcription Small Intestine intestine
2 chr15:42190400-42218600 Weak transcription Fetal Lung lung
3 chr15:42197200-42210400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr15:42197200-42210800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr15:42197200-42218600 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr15:42197400-42218600 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr15:42198200-42212000 Strong transcription HUES48 Cell Line embryonic stem cell
8 chr15:42198800-42212000 Strong transcription Primary T regulatory cells fromperipheralblood blood
9 chr15:42199000-42212600 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr15:42201200-42225400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr15:42201800-42210800 Weak transcription Thymus Thymus
12 chr15:42201800-42211000 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr15:42201800-42211600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr15:42202200-42210600 Weak transcription HepG2 liver
15 chr15:42202200-42218400 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr15:42202200-42218600 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr15:42202200-42225200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr15:42204000-42217600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
19 chr15:42204200-42212000 Strong transcription Primary T helper cells PMA-I stimulated --
20 chr15:42204400-42210800 Weak transcription Aorta Aorta
21 chr15:42207800-42210600 Enhancers Brain Substantia Nigra brain
22 chr15:42208000-42210800 Genic enhancers Adipose Nuclei Adipose
23 chr15:42208200-42210400 Genic enhancers HSMM muscle
24 chr15:42208200-42210800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
25 chr15:42208200-42211000 Genic enhancers HMEC breast
26 chr15:42208200-42212000 Strong transcription HUES6 Cell Line embryonic stem cell
27 chr15:42208200-42212000 Strong transcription Primary T cells from cord blood blood
28 chr15:42208200-42212000 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr15:42208200-42212000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr15:42208400-42212000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr15:42208400-42212000 Strong transcription H9 Cell Line embryonic stem cell
32 chr15:42208400-42212000 Genic enhancers Fetal Muscle Leg muscle
33 chr15:42208400-42212000 Genic enhancers Lung lung
34 chr15:42208400-42212800 Genic enhancers Placenta Placenta
35 chr15:42208400-42214400 Enhancers Right Atrium heart
36 chr15:42208400-42214800 Enhancers Ovary ovary
37 chr15:42208400-42218800 Genic enhancers HUVEC blood vessel
38 chr15:42208600-42211200 Enhancers Placenta Amnion Placenta Amnion
39 chr15:42208600-42211800 Weak transcription Fetal Kidney kidney
40 chr15:42208800-42210800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr15:42208800-42210800 Enhancers Right Ventricle heart
42 chr15:42208800-42211800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr15:42209000-42210400 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr15:42209000-42211000 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr15:42209200-42210400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr15:42209200-42210600 Enhancers Brain Hippocampus Middle brain
47 chr15:42209200-42210600 Enhancers Monocytes-CD14+_RO01746 blood
48 chr15:42209200-42210800 Enhancers Brain Cingulate Gyrus brain
49 chr15:42209200-42211200 Enhancers Brain Inferior Temporal Lobe brain
50 chr15:42209200-42211200 Enhancers Fetal Heart heart

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