Variant report

Variant rs1638527
Chromosome Location chr17:19845393-19845394
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19802800-19846400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr17:19802800-19852400 Strong transcription Primary neutrophils fromperipheralblood blood
3 chr17:19803000-19851800 Strong transcription Fetal Thymus thymus
4 chr17:19803600-19845400 Strong transcription Primary T helper cells fromperipheralblood blood
5 chr17:19803600-19848000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr17:19804000-19853000 Strong transcription Dnd41 blood
7 chr17:19806400-19846200 Strong transcription Primary T helper cells PMA-I stimulated --
8 chr17:19812200-19845400 Strong transcription Liver Liver
9 chr17:19824800-19845800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
10 chr17:19825200-19848400 Strong transcription Primary T regulatory cells fromperipheralblood blood
11 chr17:19825200-19851800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr17:19827600-19851600 Strong transcription Primary monocytes fromperipheralblood blood
13 chr17:19827600-19852800 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr17:19830600-19851200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr17:19831600-19851400 Strong transcription Primary B cells from peripheral blood blood
16 chr17:19832000-19845400 Strong transcription Duodenum Mucosa Duodenum
17 chr17:19837800-19846400 Strong transcription Primary T cells from cord blood blood
18 chr17:19838600-19851600 Weak transcription Psoas Muscle Psoas
19 chr17:19839800-19846000 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr17:19839800-19849800 Weak transcription Placenta Amnion Placenta Amnion
21 chr17:19840000-19846200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr17:19840000-19846600 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr17:19840000-19849400 Weak transcription Colonic Mucosa Colon
24 chr17:19840000-19851600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr17:19840000-19879200 Weak transcription Fetal Brain Male brain
26 chr17:19840200-19845600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr17:19840200-19848200 Weak transcription K562 blood
28 chr17:19840400-19846600 Weak transcription Brain Germinal Matrix brain
29 chr17:19841200-19848200 Weak transcription Fetal Brain Female brain
30 chr17:19841600-19848600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr17:19841600-19852800 Strong transcription Primary B cells from cord blood blood
32 chr17:19841800-19851600 Strong transcription Primary hematopoietic stem cells short term culture blood
33 chr17:19841800-19852600 Strong transcription Fetal Intestine Large intestine
34 chr17:19842000-19850000 Weak transcription Gastric stomach
35 chr17:19842000-19850000 Weak transcription Pancreas Pancrea
36 chr17:19842000-19852600 Strong transcription Hela-S3 cervix
37 chr17:19842200-19846600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr17:19842400-19846600 Weak transcription Lung lung
39 chr17:19842400-19850000 Weak transcription Aorta Aorta
40 chr17:19842400-19851800 Strong transcription Primary hematopoietic stem cells blood
41 chr17:19842600-19845600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr17:19842600-19846600 Enhancers Brain Cingulate Gyrus brain
43 chr17:19842600-19851600 Strong transcription GM12878-XiMat blood
44 chr17:19842800-19846200 Weak transcription Fetal Intestine Small intestine
45 chr17:19842800-19846800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr17:19843000-19846800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr17:19843000-19850000 Weak transcription Right Ventricle heart
48 chr17:19843200-19846200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr17:19843200-19846200 Weak transcription Fetal Stomach stomach
50 chr17:19843200-19846400 Weak transcription Fetal Muscle Leg muscle

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