Variant report

Variant rs17686839
Chromosome Location chr17:20039171-20039172
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20025400-20040400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr17:20025800-20044400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr17:20026200-20040000 Weak transcription Aorta Aorta
4 chr17:20026200-20049800 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr17:20029400-20042400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr17:20029600-20058800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr17:20029800-20040600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr17:20030200-20043800 Weak transcription Adipose Nuclei Adipose
9 chr17:20031600-20040200 Weak transcription Brain Angular Gyrus brain
10 chr17:20031600-20052400 Weak transcription Brain Anterior Caudate brain
11 chr17:20031800-20052600 Weak transcription Brain Hippocampus Middle brain
12 chr17:20031800-20056400 Weak transcription Brain Inferior Temporal Lobe brain
13 chr17:20032000-20058600 Weak transcription A549 lung
14 chr17:20034800-20041200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr17:20034800-20049400 Weak transcription Primary hematopoietic stem cells blood
16 chr17:20034800-20054400 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr17:20035000-20048600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr17:20036600-20040800 Strong transcription Primary monocytes fromperipheralblood blood
19 chr17:20037400-20039600 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr17:20037400-20040000 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr17:20037400-20043800 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr17:20037600-20039400 Enhancers Ovary ovary
23 chr17:20037800-20039400 Enhancers HUES6 Cell Line embryonic stem cell
24 chr17:20037800-20045000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr17:20038600-20043800 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr17:20038600-20044000 Weak transcription H9 Cell Line embryonic stem cell
27 chr17:20038600-20044000 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr17:20038800-20039400 Enhancers Spleen Spleen
29 chr17:20038800-20040200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr17:20038800-20043600 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr17:20039000-20043200 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr17:20039000-20044000 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr17:20039000-20044000 Weak transcription H1 Cell Line embryonic stem cell
34 chr17:20039000-20044000 Weak transcription iPS-20b Cell Line embryonic stem cell

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