Variant report

Variant rs2526464
Chromosome Location chr17:20075052-20075053
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20060400-20079400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr17:20060600-20075400 Weak transcription A549 lung
3 chr17:20060600-20076400 Weak transcription HSMM muscle
4 chr17:20060800-20092200 Weak transcription Fetal Intestine Small intestine
5 chr17:20061000-20075200 Weak transcription NH-A brain
6 chr17:20061400-20075200 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr17:20061600-20080000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr17:20061800-20075400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr17:20062000-20090400 Weak transcription Aorta Aorta
10 chr17:20062200-20075200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr17:20062200-20075800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr17:20063400-20075200 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr17:20063400-20075200 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr17:20063600-20075200 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr17:20068600-20075200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr17:20068800-20075200 Weak transcription H9 Cell Line embryonic stem cell
17 chr17:20073200-20075800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr17:20073200-20077000 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr17:20073200-20079000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr17:20073200-20079200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr17:20073200-20079400 Enhancers Brain Substantia Nigra brain
22 chr17:20073200-20080600 Enhancers Brain Hippocampus Middle brain
23 chr17:20073400-20075600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
24 chr17:20073400-20076000 Strong transcription Primary monocytes fromperipheralblood blood
25 chr17:20073400-20077000 Enhancers Brain Angular Gyrus brain
26 chr17:20073400-20077000 Enhancers Brain Anterior Caudate brain
27 chr17:20073400-20077000 Enhancers Brain Inferior Temporal Lobe brain
28 chr17:20073400-20077600 Enhancers Osteobl bone
29 chr17:20073400-20078000 Enhancers Cortex derived primary cultured neurospheres brain
30 chr17:20073400-20079400 Enhancers Brain Cingulate Gyrus brain
31 chr17:20073400-20080400 Enhancers HUES6 Cell Line embryonic stem cell
32 chr17:20073600-20075200 Weak transcription HSMMtube muscle
33 chr17:20073600-20075400 Weak transcription Spleen Spleen
34 chr17:20073600-20077400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr17:20073600-20077600 Enhancers Hela-S3 cervix
36 chr17:20073600-20078200 Weak transcription Left Ventricle heart
37 chr17:20073800-20078600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr17:20074000-20075200 Weak transcription Gastric stomach
39 chr17:20074200-20076400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr17:20074200-20077000 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr17:20074400-20076000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr17:20074400-20076200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr17:20074400-20077000 Enhancers Fetal Heart heart
44 chr17:20074600-20076000 Enhancers Brain Germinal Matrix brain
45 chr17:20074600-20077000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr17:20074800-20075400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr17:20074800-20076000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr17:20074800-20078400 Enhancers HMEC breast
49 chr17:20074800-20080400 Enhancers H1 Cell Line embryonic stem cell
50 chr17:20075000-20075400 Enhancers Rectal Mucosa Donor 29 rectum

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