The 2.0 version of rSNPBase

Variant report

Variant rs8074047
Chromosome Location chr17:20176703-20176704
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20136400-20209800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr17:20151600-20190000 Weak transcription Colonic Mucosa Colon
3 chr17:20161800-20180200 Weak transcription Placenta Amnion Placenta Amnion
4 chr17:20162000-20187600 Weak transcription Pancreas Pancrea
5 chr17:20164000-20200200 Weak transcription Fetal Intestine Large intestine
6 chr17:20164000-20205600 Weak transcription Esophagus oesophagus
7 chr17:20164200-20200200 Weak transcription H1 Cell Line embryonic stem cell
8 chr17:20164400-20202200 Weak transcription Duodenum Mucosa Duodenum
9 chr17:20164600-20203800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr17:20164600-20204000 Weak transcription Gastric stomach
11 chr17:20165000-20182000 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr17:20165600-20177200 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr17:20165800-20180400 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr17:20166000-20185000 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr17:20166600-20187400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr17:20167200-20183200 Weak transcription H9 Cell Line embryonic stem cell
17 chr17:20167400-20187600 Weak transcription A549 lung
18 chr17:20167400-20200200 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr17:20168000-20177000 Enhancers Primary T helper cells PMA-I stimulated --
20 chr17:20168200-20182000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr17:20168200-20182400 Enhancers Primary T helper naive cells from peripheral blood blood
22 chr17:20170000-20182000 Enhancers Primary T helper cells fromperipheralblood blood
23 chr17:20170400-20209600 Weak transcription HMEC breast
24 chr17:20170600-20179600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr17:20170800-20177400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr17:20171000-20176800 Weak transcription Hela-S3 cervix
27 chr17:20171200-20179000 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr17:20171200-20200200 Weak transcription Lung lung
29 chr17:20171400-20187400 Weak transcription HSMM muscle
30 chr17:20171400-20187800 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr17:20171600-20176800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr17:20171600-20181600 Weak transcription HSMMtube muscle
33 chr17:20171600-20183800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr17:20173000-20177200 Strong transcription Cortex derived primary cultured neurospheres brain
35 chr17:20173200-20178600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr17:20173400-20176800 Weak transcription NHEK skin
37 chr17:20173400-20180200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr17:20173400-20180200 Weak transcription Brain Cingulate Gyrus brain
39 chr17:20173400-20180200 Weak transcription Spleen Spleen
40 chr17:20173400-20187600 Weak transcription Aorta Aorta
41 chr17:20173400-20197600 Weak transcription Brain Germinal Matrix brain
42 chr17:20173600-20179800 Weak transcription Adipose Nuclei Adipose
43 chr17:20173600-20180000 Weak transcription Brain Substantia Nigra brain
44 chr17:20173600-20180200 Weak transcription Brain Inferior Temporal Lobe brain
45 chr17:20173800-20180200 Weak transcription Ovary ovary
46 chr17:20174000-20180600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
47 chr17:20174400-20176800 Enhancers Primary T cells from cord blood blood
48 chr17:20174400-20200200 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr17:20174600-20179800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr17:20174800-20176800 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015