Variant report

Variant rs2080673
Chromosome Location chr17:20062395-20062396
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20060200-20063800 Enhancers Spleen Spleen
2 chr17:20060400-20079400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr17:20060600-20062400 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr17:20060600-20062800 Weak transcription Lung lung
5 chr17:20060600-20063000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
6 chr17:20060600-20063200 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr17:20060600-20063200 Weak transcription Duodenum Mucosa Duodenum
8 chr17:20060600-20063600 Weak transcription Gastric stomach
9 chr17:20060600-20075400 Weak transcription A549 lung
10 chr17:20060600-20076400 Weak transcription HSMM muscle
11 chr17:20060800-20062600 Weak transcription Osteobl bone
12 chr17:20060800-20062800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
13 chr17:20060800-20063000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
14 chr17:20060800-20063200 Enhancers Ovary ovary
15 chr17:20060800-20063600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr17:20060800-20066600 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr17:20060800-20067600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr17:20060800-20068000 Weak transcription H9 Cell Line embryonic stem cell
19 chr17:20060800-20073200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr17:20060800-20075000 Weak transcription NHEK skin
21 chr17:20060800-20092200 Weak transcription Fetal Intestine Small intestine
22 chr17:20061000-20075200 Weak transcription NH-A brain
23 chr17:20061200-20062800 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr17:20061400-20062600 Weak transcription GM12878-XiMat blood
25 chr17:20061400-20063000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr17:20061400-20063200 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr17:20061400-20064000 Strong transcription Primary monocytes fromperipheralblood blood
28 chr17:20061400-20068600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr17:20061400-20073600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr17:20061400-20075200 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr17:20061600-20062800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr17:20061600-20062800 Enhancers Cortex derived primary cultured neurospheres brain
33 chr17:20061600-20080000 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr17:20061800-20063400 Enhancers HSMMtube muscle
35 chr17:20061800-20063800 Enhancers Brain Cingulate Gyrus brain
36 chr17:20061800-20067800 Weak transcription Brain Germinal Matrix brain
37 chr17:20061800-20069000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr17:20061800-20075400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr17:20062000-20062600 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr17:20062000-20063400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr17:20062000-20063800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr17:20062000-20063800 Enhancers Brain Substantia Nigra brain
43 chr17:20062000-20065000 Enhancers Brain Hippocampus Middle brain
44 chr17:20062000-20067000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr17:20062000-20068000 Weak transcription Fetal Brain Female brain
46 chr17:20062000-20074400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr17:20062000-20074800 Weak transcription HMEC breast
48 chr17:20062000-20090400 Weak transcription Aorta Aorta
49 chr17:20062200-20062600 Weak transcription Brain Anterior Caudate brain
50 chr17:20062200-20062800 Weak transcription iPS-20b Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links