Variant report

Variant rs9892630
Chromosome Location chr17:20182924-20182925
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20136400-20209800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr17:20151600-20190000 Weak transcription Colonic Mucosa Colon
3 chr17:20162000-20187600 Weak transcription Pancreas Pancrea
4 chr17:20164000-20200200 Weak transcription Fetal Intestine Large intestine
5 chr17:20164000-20205600 Weak transcription Esophagus oesophagus
6 chr17:20164200-20200200 Weak transcription H1 Cell Line embryonic stem cell
7 chr17:20164400-20202200 Weak transcription Duodenum Mucosa Duodenum
8 chr17:20164600-20203800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr17:20164600-20204000 Weak transcription Gastric stomach
10 chr17:20166000-20185000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr17:20166600-20187400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr17:20167200-20183200 Weak transcription H9 Cell Line embryonic stem cell
13 chr17:20167400-20187600 Weak transcription A549 lung
14 chr17:20167400-20200200 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr17:20170400-20209600 Weak transcription HMEC breast
16 chr17:20171200-20200200 Weak transcription Lung lung
17 chr17:20171400-20187400 Weak transcription HSMM muscle
18 chr17:20171400-20187800 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr17:20171600-20183800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr17:20173400-20187600 Weak transcription Aorta Aorta
21 chr17:20173400-20197600 Weak transcription Brain Germinal Matrix brain
22 chr17:20174400-20200200 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr17:20174800-20188400 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr17:20175000-20187800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr17:20175000-20200200 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr17:20176400-20183000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr17:20176400-20183000 Weak transcription Fetal Intestine Small intestine
28 chr17:20176800-20184400 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr17:20177000-20184400 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr17:20177000-20184400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr17:20177000-20184400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr17:20177800-20183200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr17:20178600-20185200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr17:20179000-20186600 Enhancers Primary monocytes fromperipheralblood blood
35 chr17:20179200-20184800 Weak transcription Fetal Muscle Trunk muscle
36 chr17:20179200-20186400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr17:20180000-20185200 Weak transcription GM12878-XiMat blood
38 chr17:20180400-20183800 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr17:20180400-20184000 Strong transcription Rectal Mucosa Donor 31 rectum
40 chr17:20180400-20184200 Strong transcription Hela-S3 cervix
41 chr17:20180400-20185600 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr17:20180400-20200200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr17:20180400-20203400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr17:20180600-20183600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr17:20180600-20184600 Weak transcription Brain Inferior Temporal Lobe brain
46 chr17:20180600-20184600 Weak transcription Ovary ovary
47 chr17:20180600-20184800 Weak transcription Brain Angular Gyrus brain
48 chr17:20180600-20185200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr17:20180600-20185200 Weak transcription NHEK skin
50 chr17:20180600-20187600 Weak transcription Skeletal Muscle Male skeletal muscle

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