Variant report

Variant rs2526483
Chromosome Location chr17:20112216-20112217
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20102000-20118400 Weak transcription Pancreas Pancrea
2 chr17:20102400-20115200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr17:20104000-20113600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr17:20104000-20119600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr17:20104200-20120800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr17:20105000-20119000 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr17:20106600-20119600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr17:20106800-20130200 Weak transcription Fetal Stomach stomach
9 chr17:20106800-20131400 Weak transcription Fetal Intestine Large intestine
10 chr17:20107000-20121200 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr17:20107400-20118400 Weak transcription Left Ventricle heart
12 chr17:20107400-20119800 Strong transcription Primary monocytes fromperipheralblood blood
13 chr17:20107600-20114800 Weak transcription Spleen Spleen
14 chr17:20107600-20116400 Weak transcription Lung lung
15 chr17:20107600-20117000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr17:20107600-20131600 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr17:20108000-20120200 Weak transcription GM12878-XiMat blood
18 chr17:20108000-20130200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr17:20108000-20130200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr17:20108400-20114200 Weak transcription Fetal Intestine Small intestine
21 chr17:20108400-20119200 Weak transcription Brain Germinal Matrix brain
22 chr17:20108400-20131400 Weak transcription Duodenum Mucosa Duodenum
23 chr17:20108800-20112400 Weak transcription Primary hematopoietic stem cells blood
24 chr17:20108800-20115000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr17:20109200-20114400 Enhancers Brain Hippocampus Middle brain
26 chr17:20109600-20113400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr17:20109600-20113400 Weak transcription Aorta Aorta
28 chr17:20109600-20113600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr17:20109600-20115000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr17:20109600-20115000 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr17:20109600-20115000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr17:20109600-20115200 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr17:20109600-20118200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr17:20109600-20119400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr17:20109600-20135200 Weak transcription Gastric stomach
36 chr17:20109800-20115000 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr17:20109800-20116800 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr17:20110400-20112600 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr17:20110400-20114600 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr17:20110400-20116800 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr17:20110400-20119200 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr17:20110600-20115000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr17:20110600-20115000 Weak transcription HSMM muscle
44 chr17:20110600-20118800 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr17:20110600-20119000 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr17:20110600-20120600 Weak transcription Primary T cells from cord blood blood
47 chr17:20110800-20130400 Weak transcription HSMMtube muscle
48 chr17:20111200-20118200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr17:20111400-20113600 Enhancers Brain Cingulate Gyrus brain
50 chr17:20111400-20113800 Enhancers Brain Substantia Nigra brain

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