Variant report

Variant rs8071665
Chromosome Location chr17:20209943-20209944
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20187800-20223800 Weak transcription Pancreas Pancrea
2 chr17:20201000-20220000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr17:20204400-20216800 Weak transcription Gastric stomach
4 chr17:20204800-20212200 Weak transcription Placenta Amnion Placenta Amnion
5 chr17:20205800-20210400 Weak transcription Muscle Satellite Cultured Cells --
6 chr17:20206800-20210600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr17:20207800-20211000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr17:20207800-20211200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
9 chr17:20207800-20211400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr17:20208000-20211400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr17:20208000-20212000 ZNF genes & repeats A549 lung
12 chr17:20208000-20212200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
13 chr17:20208200-20211400 Strong transcription Hela-S3 cervix
14 chr17:20208400-20213000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr17:20208600-20210200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr17:20208600-20213000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr17:20208600-20213000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr17:20208800-20213000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
19 chr17:20209000-20211200 ZNF genes & repeats Fetal Brain Female brain
20 chr17:20209000-20211400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
21 chr17:20209200-20211000 Strong transcription Rectal Mucosa Donor 31 rectum
22 chr17:20209200-20211200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
23 chr17:20209400-20210000 Strong transcription Brain Cingulate Gyrus brain
24 chr17:20209400-20211000 ZNF genes & repeats H1 Cell Line embryonic stem cell
25 chr17:20209400-20211000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
26 chr17:20209400-20211000 ZNF genes & repeats NHEK skin
27 chr17:20209400-20211200 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr17:20209400-20211200 ZNF genes & repeats Brain Germinal Matrix brain
29 chr17:20209400-20211200 ZNF genes & repeats Brain Hippocampus Middle brain
30 chr17:20209400-20211200 ZNF genes & repeats Brain Inferior Temporal Lobe brain
31 chr17:20209400-20211200 ZNF genes & repeats Duodenum Mucosa Duodenum
32 chr17:20209400-20211200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
33 chr17:20209400-20211400 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr17:20209400-20211400 ZNF genes & repeats Adipose Nuclei Adipose
35 chr17:20209400-20211600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
36 chr17:20209400-20211600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
37 chr17:20209400-20213000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
38 chr17:20209400-20213200 ZNF genes & repeats Primary hematopoietic stem cells blood
39 chr17:20209600-20210000 Strong transcription Osteobl bone
40 chr17:20209600-20210800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
41 chr17:20209600-20211000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
42 chr17:20209600-20211000 ZNF genes & repeats HMEC breast
43 chr17:20209600-20211200 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
44 chr17:20209600-20211600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr17:20209800-20210000 Weak transcription Colonic Mucosa Colon
46 chr17:20209800-20210200 ZNF genes & repeats Aorta Aorta
47 chr17:20209800-20210200 ZNF genes & repeats Fetal Intestine Small intestine
48 chr17:20209800-20210200 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
49 chr17:20209800-20210400 ZNF genes & repeats Primary B cells from cord blood blood
50 chr17:20209800-20211000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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