Variant report

Variant rs4925084
Chromosome Location chr17:19998958-19998959
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19978800-20000000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr17:19993400-20006400 Weak transcription Placenta Amnion Placenta Amnion
3 chr17:19993600-20000000 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr17:19993600-20003600 Weak transcription Primary neutrophils fromperipheralblood blood
5 chr17:19993800-20000600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr17:19993800-20001600 Weak transcription Lung lung
7 chr17:19993800-20006400 Weak transcription Esophagus oesophagus
8 chr17:19993800-20008800 Weak transcription GM12878-XiMat blood
9 chr17:19995000-20000000 Weak transcription Right Ventricle heart
10 chr17:19995000-20001200 Weak transcription Primary hematopoietic stem cells blood
11 chr17:19996600-20000800 Weak transcription Aorta Aorta
12 chr17:19996800-19999600 Weak transcription Primary monocytes fromperipheralblood blood
13 chr17:19997600-19999600 Enhancers Fetal Muscle Leg muscle
14 chr17:19997800-19999000 Enhancers NHLF lung
15 chr17:19997800-19999200 Enhancers Brain Germinal Matrix brain
16 chr17:19997800-19999200 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr17:19998200-19999000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr17:19998200-19999000 Enhancers Duodenum Smooth Muscle Duodenum
19 chr17:19998200-19999200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr17:19998200-19999200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr17:19998200-19999200 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr17:19998200-20000000 Enhancers Cortex derived primary cultured neurospheres brain
23 chr17:19998200-20000000 Enhancers Brain Substantia Nigra brain
24 chr17:19998400-19999000 Enhancers HUES64 Cell Line embryonic stem cell
25 chr17:19998400-19999000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr17:19998400-19999000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr17:19998400-19999000 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr17:19998400-19999000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr17:19998400-19999000 Flanking Active TSS Brain Angular Gyrus brain
30 chr17:19998400-19999200 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr17:19998400-19999200 Enhancers ES-WA7 Cell Line embryonic stem cell
32 chr17:19998400-19999200 Enhancers HUES48 Cell Line embryonic stem cell
33 chr17:19998400-19999200 Enhancers iPS-15b Cell Line embryonic stem cell
34 chr17:19998400-19999200 Enhancers iPS-20b Cell Line embryonic stem cell
35 chr17:19998400-19999200 Flanking Active TSS Brain Inferior Temporal Lobe brain
36 chr17:19998400-19999200 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr17:19998400-19999200 Flanking Active TSS A549 lung
38 chr17:19998400-19999400 Flanking Active TSS Brain Anterior Caudate brain
39 chr17:19998600-19999000 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr17:19998600-19999000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr17:19998600-19999000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr17:19998600-19999000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
43 chr17:19998600-19999000 Flanking Active TSS Adipose Nuclei Adipose
44 chr17:19998600-19999000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
45 chr17:19998600-19999000 Bivalent/Poised TSS Stomach Smooth Muscle stomach
46 chr17:19998600-19999000 Enhancers Hela-S3 cervix
47 chr17:19998600-19999000 Flanking Active TSS NHDF-Ad bronchial
48 chr17:19998600-19999200 Enhancers Primary Natural Killer cells fromperipheralblood blood
49 chr17:19998600-19999200 Enhancers Fetal Brain Male brain
50 chr17:19998600-19999400 Enhancers HUES6 Cell Line embryonic stem cell

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