The 2.0 version of rSNPBase

Variant report

Variant rs1649891
Chromosome Location chr2:231337659-231337660
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231288800-231356000 Weak transcription Stomach Mucosa stomach
2 chr2:231301800-231345000 Weak transcription A549 lung
3 chr2:231321800-231338600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr2:231322200-231340200 Strong transcription Liver Liver
5 chr2:231322600-231338200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr2:231323800-231337800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr2:231325800-231338400 Strong transcription Left Ventricle heart
8 chr2:231325800-231338600 Strong transcription Lung lung
9 chr2:231325800-231338800 Strong transcription Sigmoid Colon Sigmoid Colon
10 chr2:231328200-231338400 Strong transcription Fetal Muscle Leg muscle
11 chr2:231329600-231343800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr2:231331200-231338400 Strong transcription Rectal Mucosa Donor 31 rectum
13 chr2:231332000-231345200 Weak transcription Brain Substantia Nigra brain
14 chr2:231332200-231338200 Weak transcription Fetal Muscle Trunk muscle
15 chr2:231332400-231344400 Weak transcription Gastric stomach
16 chr2:231332800-231339200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:231333400-231339800 Genic enhancers Primary B cells from cord blood blood
18 chr2:231334200-231356000 Weak transcription Fetal Intestine Small intestine
19 chr2:231334600-231340000 Genic enhancers Primary B cells from peripheral blood blood
20 chr2:231334800-231358400 Weak transcription Fetal Stomach stomach
21 chr2:231335000-231344400 Weak transcription Aorta Aorta
22 chr2:231335000-231359000 Weak transcription NHLF lung
23 chr2:231335600-231339000 Genic enhancers Primary T helper cells PMA-I stimulated --
24 chr2:231335600-231340200 Weak transcription Fetal Intestine Large intestine
25 chr2:231335600-231344600 Weak transcription Pancreas Pancrea
26 chr2:231336000-231343800 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr2:231336000-231344400 Weak transcription Esophagus oesophagus
28 chr2:231336000-231356000 Weak transcription NHDF-Ad bronchial
29 chr2:231336200-231342200 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr2:231336200-231344400 Weak transcription HSMMtube muscle
31 chr2:231336400-231337800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr2:231336400-231338000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr2:231336400-231338400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr2:231336400-231339200 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr2:231336400-231339400 Weak transcription Psoas Muscle Psoas
36 chr2:231336400-231343800 Weak transcription Rectal Smooth Muscle rectum
37 chr2:231336400-231345200 Weak transcription Small Intestine intestine
38 chr2:231336400-231363400 Weak transcription Fetal Lung lung
39 chr2:231336600-231337800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr2:231336600-231338200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr2:231336600-231338400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr2:231336600-231339000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
43 chr2:231336600-231340000 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr2:231336600-231342200 Weak transcription Ovary ovary
45 chr2:231336600-231344200 Weak transcription Duodenum Mucosa Duodenum
46 chr2:231336600-231345000 Weak transcription Spleen Spleen
47 chr2:231336600-231356200 Weak transcription Placenta Placenta
48 chr2:231336600-231363400 Weak transcription Right Ventricle heart
49 chr2:231336800-231337800 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr2:231336800-231337800 Weak transcription Primary hematopoietic stem cells short term culture blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015