The 2.0 version of rSNPBase

Variant report

Variant rs2619158
Chromosome Location chr2:231329893-231329894
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231288800-231356000 Weak transcription Stomach Mucosa stomach
2 chr2:231301800-231345000 Weak transcription A549 lung
3 chr2:231307600-231336600 Strong transcription Duodenum Mucosa Duodenum
4 chr2:231308800-231337000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr2:231308800-231337400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr2:231309600-231336800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr2:231312400-231337000 Weak transcription HepG2 liver
8 chr2:231312400-231337200 Weak transcription Hela-S3 cervix
9 chr2:231315000-231330800 Weak transcription Placenta Amnion Placenta Amnion
10 chr2:231315000-231331800 Weak transcription Psoas Muscle Psoas
11 chr2:231319400-231330400 Strong transcription Rectal Mucosa Donor 31 rectum
12 chr2:231319600-231336000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr2:231319800-231332200 Weak transcription Fetal Heart heart
14 chr2:231319800-231336600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr2:231319800-231336800 Strong transcription Muscle Satellite Cultured Cells --
16 chr2:231319800-231336800 Strong transcription HSMM muscle
17 chr2:231320000-231336600 Strong transcription Osteobl bone
18 chr2:231321400-231336400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr2:231321800-231336600 Strong transcription Ovary ovary
20 chr2:231321800-231338600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr2:231322000-231336600 Strong transcription Fetal Adrenal Gland Adrenal Gland
22 chr2:231322200-231336600 Strong transcription Placenta Placenta
23 chr2:231322200-231340200 Strong transcription Liver Liver
24 chr2:231322400-231333600 Strong transcription GM12878-XiMat blood
25 chr2:231322600-231336200 Strong transcription Rectal Mucosa Donor 29 rectum
26 chr2:231322600-231336400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr2:231322600-231336600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
28 chr2:231322600-231336600 Strong transcription Primary T regulatory cells fromperipheralblood blood
29 chr2:231322600-231336800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr2:231322600-231336800 Strong transcription Primary T cells fromperipheralblood blood
31 chr2:231322600-231338200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr2:231322800-231332200 Strong transcription Primary T killer naive cells fromperipheralblood blood
33 chr2:231322800-231336800 Strong transcription Adipose Nuclei Adipose
34 chr2:231322800-231336800 Strong transcription Fetal Thymus thymus
35 chr2:231323000-231336800 Strong transcription Thymus Thymus
36 chr2:231323200-231330200 Strong transcription Spleen Spleen
37 chr2:231323200-231336400 Strong transcription Primary T helper naive cells from peripheral blood blood
38 chr2:231323400-231335600 Strong transcription Primary T helper cells PMA-I stimulated --
39 chr2:231323400-231336400 Strong transcription Primary T killer memory cells from peripheral blood blood
40 chr2:231323400-231336800 Strong transcription Primary T cells from cord blood blood
41 chr2:231323400-231337600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
42 chr2:231323800-231337800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr2:231324000-231334800 Strong transcription Primary hematopoietic stem cells blood
44 chr2:231324000-231336800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:231324200-231334600 Strong transcription Primary B cells from peripheral blood blood
46 chr2:231324200-231336600 Weak transcription K562 blood
47 chr2:231324200-231336600 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr2:231324400-231336800 Strong transcription Primary hematopoietic stem cells short term culture blood
49 chr2:231324600-231333400 Strong transcription Primary B cells from cord blood blood
50 chr2:231324600-231335600 Strong transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015