The 2.0 version of rSNPBase

Variant report

Variant rs1653603
Chromosome Location chr12:121611281-121611282
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121571800-121623200 Weak transcription Colonic Mucosa Colon
2 chr12:121583000-121613200 Weak transcription Primary B cells from cord blood blood
3 chr12:121583000-121634600 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr12:121583800-121623600 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr12:121583800-121634400 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr12:121584600-121626600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr12:121586200-121623600 Weak transcription Rectal Smooth Muscle rectum
8 chr12:121594000-121612600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr12:121594200-121627600 Weak transcription Right Ventricle heart
10 chr12:121596000-121614800 Weak transcription Gastric stomach
11 chr12:121596200-121622200 Weak transcription Esophagus oesophagus
12 chr12:121596200-121625600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr12:121596200-121629000 Weak transcription Left Ventricle heart
14 chr12:121596400-121634200 Weak transcription Primary hematopoietic stem cells blood
15 chr12:121597800-121625600 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr12:121599000-121617200 Weak transcription Fetal Stomach stomach
17 chr12:121602400-121634600 Weak transcription Fetal Thymus thymus
18 chr12:121603800-121623600 Weak transcription Fetal Intestine Small intestine
19 chr12:121604000-121615800 Weak transcription Duodenum Mucosa Duodenum
20 chr12:121604200-121613200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr12:121604200-121613200 Weak transcription Colon Smooth Muscle Colon
22 chr12:121604200-121613800 Weak transcription Adipose Nuclei Adipose
23 chr12:121604200-121614600 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr12:121604200-121619800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr12:121604400-121613200 Weak transcription Primary B cells from peripheral blood blood
26 chr12:121604400-121614800 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr12:121604400-121622200 Weak transcription Lung lung
28 chr12:121604600-121611400 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr12:121605000-121623400 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr12:121605400-121612400 Weak transcription Primary T cells from cord blood blood
31 chr12:121605400-121613600 Weak transcription Stomach Smooth Muscle stomach
32 chr12:121605400-121615000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr12:121606000-121612600 Weak transcription Primary T cells fromperipheralblood blood
34 chr12:121606200-121611400 Weak transcription Brain Angular Gyrus brain
35 chr12:121606200-121614600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr12:121606600-121611400 Weak transcription Liver Liver
37 chr12:121606600-121614600 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr12:121609000-121611400 Weak transcription Brain Cingulate Gyrus brain
39 chr12:121609000-121611400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr12:121609200-121612600 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr12:121609200-121613000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr12:121609200-121613200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr12:121609200-121613200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr12:121609200-121613600 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr12:121610200-121612200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr12:121610200-121612600 Enhancers Brain Hippocampus Middle brain
47 chr12:121610200-121613200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr12:121610400-121614400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr12:121610600-121614600 Weak transcription HUVEC blood vessel
50 chr12:121610800-121611800 Enhancers Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015