The 2.0 version of rSNPBase

Variant report

Variant rs2686385
Chromosome Location chr12:121628027-121628028
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121583000-121634600 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr12:121583800-121634400 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr12:121596200-121629000 Weak transcription Left Ventricle heart
4 chr12:121596400-121634200 Weak transcription Primary hematopoietic stem cells blood
5 chr12:121602400-121634600 Weak transcription Fetal Thymus thymus
6 chr12:121610800-121628800 Weak transcription Right Atrium heart
7 chr12:121612600-121630200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr12:121614000-121634600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr12:121614200-121628800 Weak transcription Adipose Nuclei Adipose
10 chr12:121620400-121634200 Weak transcription Primary T cells fromperipheralblood blood
11 chr12:121622800-121634200 Weak transcription Placenta Placenta
12 chr12:121622800-121634400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr12:121623000-121628200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr12:121623000-121628200 Weak transcription NHEK skin
15 chr12:121623200-121629000 Weak transcription Spleen Spleen
16 chr12:121623600-121634200 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr12:121623600-121634200 Weak transcription Liver Liver
18 chr12:121623600-121634400 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr12:121624000-121628600 Weak transcription Primary B cells from cord blood blood
20 chr12:121624200-121629600 Weak transcription Brain Hippocampus Middle brain
21 chr12:121624200-121647200 Weak transcription Brain Anterior Caudate brain
22 chr12:121624400-121629600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr12:121624600-121631600 Enhancers HUVEC blood vessel
24 chr12:121624800-121630200 Weak transcription Brain Substantia Nigra brain
25 chr12:121625600-121634400 Weak transcription Primary T cells from cord blood blood
26 chr12:121625600-121647200 Weak transcription Brain Cingulate Gyrus brain
27 chr12:121626400-121629800 Weak transcription Brain Angular Gyrus brain
28 chr12:121626800-121628400 Enhancers Ovary ovary
29 chr12:121627000-121628600 Enhancers NH-A brain
30 chr12:121627000-121629200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr12:121627200-121628600 Enhancers NHDF-Ad bronchial
32 chr12:121627200-121628800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr12:121627200-121628800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr12:121627200-121628800 Enhancers K562 blood
35 chr12:121627400-121628200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
36 chr12:121627400-121628400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr12:121627400-121628400 Enhancers Monocytes-CD14+_RO01746 blood
38 chr12:121627400-121628600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr12:121627400-121629600 Enhancers Osteobl bone
40 chr12:121627400-121630400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
41 chr12:121627400-121630600 Enhancers NHLF lung
42 chr12:121627600-121629600 Enhancers Primary monocytes fromperipheralblood blood
43 chr12:121627800-121628600 Enhancers Muscle Satellite Cultured Cells --
44 chr12:121627800-121628600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr12:121627800-121628800 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr12:121627800-121630600 Enhancers HSMM muscle
47 chr12:121628000-121628800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr12:121628000-121628800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr12:121628000-121628800 Enhancers GM12878-XiMat blood
50 chr12:121628000-121630200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015