The 2.0 version of rSNPBase

Variant report

Variant rs1655982
Chromosome Location chr1:213500776-213500777
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213497800-213500800 Weak transcription Right Atrium heart
2 chr1:213498400-213501400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
3 chr1:213498400-213504600 Enhancers Cortex derived primary cultured neurospheres brain
4 chr1:213498600-213501200 Enhancers ES-I3 Cell Line embryonic stem cell
5 chr1:213498600-213501400 Enhancers Primary monocytes fromperipheralblood blood
6 chr1:213498800-213501200 Enhancers Fetal Brain Male brain
7 chr1:213498800-213501800 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr1:213499200-213500800 Weak transcription Fetal Brain Female brain
9 chr1:213499200-213501000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:213499200-213501000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:213499200-213501000 Enhancers Brain Anterior Caudate brain
12 chr1:213499200-213501400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:213499200-213501400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:213499200-213504200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:213499400-213501000 Enhancers HSMM muscle
16 chr1:213499400-213501400 Enhancers Brain Germinal Matrix brain
17 chr1:213499600-213501200 Enhancers HMEC breast
18 chr1:213499600-213501400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:213499800-213501000 Enhancers ES-WA7 Cell Line embryonic stem cell
20 chr1:213499800-213501000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:213499800-213501000 Enhancers Brain Angular Gyrus brain
22 chr1:213499800-213501000 Enhancers Brain Inferior Temporal Lobe brain
23 chr1:213499800-213501000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
24 chr1:213499800-213501000 Enhancers NHDF-Ad bronchial
25 chr1:213499800-213501200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:213499800-213501200 Flanking Active TSS NH-A brain
27 chr1:213499800-213501400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:213500000-213500800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:213500000-213500800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
30 chr1:213500000-213501000 Flanking Active TSS Muscle Satellite Cultured Cells --
31 chr1:213500000-213501000 Enhancers NHEK skin
32 chr1:213500000-213501200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:213500000-213501400 Enhancers Placenta Placenta
34 chr1:213500200-213501000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:213500200-213501000 Enhancers Fetal Lung lung
36 chr1:213500200-213504000 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr1:213500400-213504600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:213500600-213500800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:213500600-213500800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr1:213500600-213501000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:213500600-213501000 Enhancers Brain Cingulate Gyrus brain
42 chr1:213500600-213501000 Enhancers Placenta Amnion Placenta Amnion
43 chr1:213500600-213501000 Flanking Active TSS HSMMtube muscle
44 chr1:213500600-213501000 Flanking Active TSS Osteobl bone

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Last update: Aug 31, 2015