Variant report

Variant	rs1187794
Chromosome Location	chr1:213480816-213480817
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1187788	0.92[AFR][1000 genomes]
rs1187789	0.91[AFR][1000 genomes]
rs1187797	0.91[AFR][1000 genomes]
rs1187803	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs1187804	0.91[AFR][1000 genomes]
rs1469786	0.91[AFR][1000 genomes]
rs1655982	0.85[ASN][1000 genomes]
rs1699185	0.87[ASN][1000 genomes]
rs17020474	0.86[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2841420	0.91[AFR][1000 genomes]
rs60527029	0.98[ASN][1000 genomes]
rs7354948	0.86[AMR][1000 genomes]
rs971184	0.91[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3392967	chr1:213271844-213490132	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:213474800-213487400	Weak transcription	Right Atrium	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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