Variant report

Variant rs1658978
Chromosome Location chr9:6640930-6640931
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:6631400-6641200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr9:6633600-6641000 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr9:6633600-6641000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr9:6633600-6641200 Weak transcription H9 Cell Line embryonic stem cell
5 chr9:6633600-6641200 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr9:6633600-6642600 Weak transcription NHEK skin
7 chr9:6633600-6643200 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr9:6633800-6644200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr9:6635800-6641200 Weak transcription Fetal Intestine Large intestine
10 chr9:6638400-6641000 Enhancers Liver Liver
11 chr9:6639200-6641000 Enhancers Skeletal Muscle Male skeletal muscle
12 chr9:6639800-6642200 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
13 chr9:6640000-6644200 Weak transcription Fetal Brain Male brain
14 chr9:6640200-6641000 Weak transcription Fetal Kidney kidney
15 chr9:6640200-6641200 Enhancers Esophagus oesophagus
16 chr9:6640200-6641600 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr9:6640200-6642200 Enhancers Cortex derived primary cultured neurospheres brain
18 chr9:6640200-6642200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
19 chr9:6640400-6641200 Enhancers Brain Inferior Temporal Lobe brain
20 chr9:6640400-6641600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr9:6640400-6644200 Weak transcription Psoas Muscle Psoas
22 chr9:6640600-6641000 Weak transcription H1 Cell Line embryonic stem cell
23 chr9:6640600-6641000 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr9:6640600-6641000 Weak transcription Placenta Placenta
25 chr9:6640600-6642200 Genic enhancers HepG2 liver
26 chr9:6640600-6643000 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr9:6640800-6641200 Active TSS GM12878-XiMat blood
28 chr9:6640800-6642000 Strong transcription HUES64 Cell Line embryonic stem cell
29 chr9:6640800-6643000 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr9:6640800-6643200 Weak transcription ES-I3 Cell Line embryonic stem cell

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