Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:64166187..64170044-chr11:64170239..64173432,3	K562	blood:
2	chr11:64167785..64169689-chr11:64170105..64171760,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10792432	0.97[EUR][1000 genomes]
rs10897503	0.94[CEU][hapmap];0.87[EUR][1000 genomes]
rs11231749	0.81[JPT][hapmap]
rs11231776	0.86[JPT][hapmap]
rs12362958	0.82[AMR][1000 genomes]
rs2083711	0.88[EUR][1000 genomes]
rs28680814	0.82[AMR][1000 genomes]
rs4930353	0.83[CEU][hapmap];0.82[AMR][1000 genomes]
rs521319	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs548333	0.94[CEU][hapmap];0.82[CHB][hapmap];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs561667	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs562560	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs564163	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs566409	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs577304	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61884054	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs653565	0.82[CEU][hapmap]
rs653578	0.82[CEU][hapmap]
rs72929971	0.82[AMR][1000 genomes]
rs731703	0.81[JPT][hapmap]
rs7936543	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7937023	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7937125	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7951702	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9787810	0.81[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832187	chr11:64121969-64312300	Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64164400-64171800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:64168000-64173400	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr11:64168200-64173000	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr11:64168400-64173600	Weak transcription	Spleen	Spleen
5	chr11:64170800-64173600	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr11:64171000-64175200	Weak transcription	Fetal Brain Male	brain
7	chr11:64171400-64172000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr11:64171400-64173000	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr11:64171400-64173000	Enhancers	Monocytes-CD14+_RO01746	blood

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