Variant report

No data

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	11:64184313-64187414..11:64519906-64523887	Hela-S3	cervix:
2	11:64184313-64187414..11:64426650-64437729	K562	blood:
3	11:64184313-64187414..11:64402707-64415880	GM12878	blood:
4	11:64184313-64187414..11:64642645-64655002	K562	blood:
5	11:64184313-64187414..11:64530985-64535815	GM12878	blood:
6	11:64184313-64187414..11:64538326-64543055	GM12878	blood:
7	11:64184313-64187414..11:64489786-64499245	GM12878	blood:
8	11:64184313-64187414..11:64535815-64538326	K562	blood:
9	11:64184313-64187414..11:64523887-64530985	Hela-S3	cervix:
10	11:64184313-64187414..11:64356433-64395036	GM12878	blood:
11	11:64184313-64187414..11:64415880-64426617	GM12878	blood:
12	11:64184313-64187414..11:64501239-64517861	GM12878	blood:
13	11:64184313-64187414..11:64517861-64519906	GM12878	blood:
14	11:64184313-64187414..11:64322633-64349180	Hela-S3	cervix:

No data

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10792432	0.90[EUR][1000 genomes]
rs10897503	0.95[EUR][1000 genomes]
rs12362958	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1662189	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28680814	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4930353	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs521319	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs548333	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs561667	0.85[EUR][1000 genomes]
rs562560	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs564163	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs566409	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs577304	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs653565	0.81[EUR][1000 genomes]
rs653578	0.80[EUR][1000 genomes]
rs72929971	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7936543	0.87[EUR][1000 genomes]
rs7937023	0.87[EUR][1000 genomes]
rs7937125	0.87[EUR][1000 genomes]
rs7951702	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832187	chr11:64121969-64312300	Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv976458	chr11:64183936-64198230	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	nsv976459	chr11:64183936-64208134	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64182800-64196000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr11:64183600-64186000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:64183800-64186600	Weak transcription	Placenta	Placenta
4	chr11:64185600-64186200	Enhancers	Primary B cells from peripheral blood	blood

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