Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10899997	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10899998	0.80[ASN][1000 genomes]
rs10899999	0.80[ASN][1000 genomes]
rs11238904	0.80[ASN][1000 genomes]
rs11238905	0.80[ASN][1000 genomes]
rs11238907	0.80[ASN][1000 genomes]
rs11238909	0.80[ASN][1000 genomes]
rs11598296	0.80[ASN][1000 genomes]
rs11598314	0.80[ASN][1000 genomes]
rs11817838	0.80[ASN][1000 genomes]
rs12415866	0.80[ASN][1000 genomes]
rs1482473	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1509929	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1509931	0.80[ASN][1000 genomes]
rs1623851	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1626459	0.80[ASN][1000 genomes]
rs1627329	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1704214	0.80[ASN][1000 genomes]
rs17155641	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1905150	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2246891	0.80[ASN][1000 genomes]
rs4948857	0.80[ASN][1000 genomes]
rs61855758	0.80[ASN][1000 genomes]
rs7909598	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7917089	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038511	chr10:44596885-44870030	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44706200-44710400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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