The 2.0 version of rSNPBase

Variant report

Variant rs1681938
Chromosome Location chr6:64352605-64352606
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:64347000-64354800 Weak transcription Lung lung
2 chr6:64347000-64370600 Weak transcription Left Ventricle heart
3 chr6:64347000-64383200 Weak transcription Esophagus oesophagus
4 chr6:64347000-64422400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:64347200-64353200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr6:64347200-64356400 Weak transcription Aorta Aorta
7 chr6:64347400-64355000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr6:64347400-64357000 Weak transcription Placenta Placenta
9 chr6:64347400-64358400 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr6:64347400-64359600 Weak transcription Fetal Muscle Trunk muscle
11 chr6:64347400-64370800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr6:64347600-64365200 Weak transcription Fetal Stomach stomach
13 chr6:64347600-64381000 Weak transcription Fetal Thymus thymus
14 chr6:64347800-64353800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr6:64347800-64354600 Weak transcription Primary T cells fromperipheralblood blood
16 chr6:64347800-64355400 Enhancers Primary T helper naive cells fromperipheralblood blood
17 chr6:64347800-64357000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr6:64347800-64358400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr6:64347800-64361400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr6:64347800-64370600 Weak transcription H9 Cell Line embryonic stem cell
21 chr6:64347800-64386400 Weak transcription Colonic Mucosa Colon
22 chr6:64348000-64356600 Weak transcription H1 Cell Line embryonic stem cell
23 chr6:64348600-64353400 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr6:64348600-64355800 Enhancers Primary T helper cells fromperipheralblood blood
25 chr6:64348800-64353400 Weak transcription HUVEC blood vessel
26 chr6:64348800-64353800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr6:64348800-64355200 Enhancers Brain Substantia Nigra brain
28 chr6:64349000-64354400 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr6:64349400-64356200 Enhancers Brain Inferior Temporal Lobe brain
30 chr6:64349400-64370600 Weak transcription Stomach Smooth Muscle stomach
31 chr6:64349800-64353800 Weak transcription Primary B cells from cord blood blood
32 chr6:64350000-64353600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr6:64350000-64353800 Weak transcription Primary hematopoietic stem cells blood
34 chr6:64350000-64363000 Weak transcription Brain Germinal Matrix brain
35 chr6:64350200-64353400 Weak transcription Primary monocytes fromperipheralblood blood
36 chr6:64350200-64353600 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr6:64350200-64359800 Weak transcription Placenta Amnion Placenta Amnion
38 chr6:64350200-64374400 Enhancers Primary T helper cells PMA-I stimulated --
39 chr6:64350200-64381200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr6:64350200-64382800 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr6:64350400-64353200 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr6:64350400-64353400 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr6:64350400-64353400 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr6:64350400-64354600 Weak transcription NH-A brain
45 chr6:64350400-64358000 Weak transcription Fetal Kidney kidney
46 chr6:64350400-64359200 Weak transcription Stomach Mucosa stomach
47 chr6:64350400-64368400 Weak transcription Fetal Brain Male brain
48 chr6:64350400-64369600 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr6:64350600-64353200 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr6:64350600-64353200 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015