Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1070197	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs167284	1.00[ASN][1000 genomes]
rs16822777	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16822795	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16822803	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16822812	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16822843	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16822851	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16822918	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16822938	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2568683	0.87[EUR][1000 genomes]
rs2568684	0.87[EUR][1000 genomes]
rs2568686	0.87[EUR][1000 genomes]
rs2623421	0.81[EUR][1000 genomes]
rs300888	0.87[EUR][1000 genomes]
rs711807	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73032449	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73036255	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs833130	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs833134	1.00[ASN][1000 genomes]
rs833138	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs833139	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs833157	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875477	chr2:182938377-183086478	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:183013600-183048000	Weak transcription	Aorta	Aorta
2	chr2:183019400-183048200	Weak transcription	Left Ventricle	heart
3	chr2:183025600-183046000	Weak transcription	Fetal Stomach	stomach
4	chr2:183030400-183034800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr2:183032800-183042800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr2:183033400-183048000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

Quick Search: