The 2.0 version of rSNPBase

Variant report

Variant rs16831880
Chromosome Location chr2:190560714-190560715
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190540000-190563400 Weak transcription Aorta Aorta
2 chr2:190540200-190578000 Weak transcription Fetal Brain Male brain
3 chr2:190540400-190564200 Weak transcription Placenta Placenta
4 chr2:190540400-190572000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr2:190540400-190576400 Weak transcription Fetal Muscle Trunk muscle
6 chr2:190540800-190561000 Weak transcription HepG2 liver
7 chr2:190540800-190562800 Weak transcription Liver Liver
8 chr2:190540800-190563800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr2:190540800-190572200 Weak transcription Stomach Smooth Muscle stomach
10 chr2:190540800-190576400 Weak transcription Pancreas Pancrea
11 chr2:190540800-190592600 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr2:190540800-190611800 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr2:190540800-190618400 Weak transcription Brain Cingulate Gyrus brain
14 chr2:190541600-190617000 Weak transcription Colon Smooth Muscle Colon
15 chr2:190543600-190575400 Weak transcription Fetal Intestine Large intestine
16 chr2:190543800-190563200 Weak transcription Brain Anterior Caudate brain
17 chr2:190546200-190563200 Weak transcription Psoas Muscle Psoas
18 chr2:190546200-190576400 Weak transcription Lung lung
19 chr2:190550600-190561000 Weak transcription Adipose Nuclei Adipose
20 chr2:190550600-190563200 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr2:190550600-190569800 Weak transcription Left Ventricle heart
22 chr2:190550600-190579000 Weak transcription Spleen Spleen
23 chr2:190550800-190563200 Weak transcription Osteobl bone
24 chr2:190550800-190568200 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr2:190550800-190569600 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr2:190550800-190570800 Weak transcription Fetal Stomach stomach
27 chr2:190550800-190571000 Weak transcription Ovary ovary
28 chr2:190550800-190571800 Weak transcription NHDF-Ad bronchial
29 chr2:190550800-190576200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr2:190550800-190576400 Weak transcription Fetal Muscle Leg muscle
31 chr2:190550800-190577600 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr2:190550800-190578400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:190550800-190579000 Weak transcription Fetal Thymus thymus
34 chr2:190550800-190579400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr2:190550800-190591400 Weak transcription Primary T cells fromperipheralblood blood
36 chr2:190550800-190617000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:190550800-190626800 Weak transcription Right Ventricle heart
38 chr2:190551000-190563000 Weak transcription Primary T cells from cord blood blood
39 chr2:190551000-190571000 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr2:190551200-190563200 Weak transcription Primary hematopoietic stem cells blood
41 chr2:190551200-190572400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr2:190551200-190603400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr2:190551200-190617000 Weak transcription HSMM muscle
44 chr2:190551400-190562600 Weak transcription Dnd41 blood
45 chr2:190551400-190562800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr2:190551400-190563200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr2:190551400-190564200 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr2:190552000-190576200 Weak transcription Rectal Smooth Muscle rectum
49 chr2:190553000-190563200 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr2:190553200-190576200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015