The 2.0 version of rSNPBase

Variant report

Variant rs16846735
Chromosome Location chr1:227140703-227140704
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227129000-227162600 Weak transcription Fetal Kidney kidney
2 chr1:227130200-227145600 Weak transcription Primary hematopoietic stem cells blood
3 chr1:227130200-227146000 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr1:227130400-227141000 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr1:227130400-227142400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:227130400-227142400 Weak transcription Hela-S3 cervix
7 chr1:227130400-227154600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:227130800-227142400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:227131000-227171800 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr1:227131400-227153800 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr1:227131800-227147200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:227133000-227146200 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:227133200-227149800 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr1:227133400-227141400 Weak transcription K562 blood
15 chr1:227133600-227142600 Weak transcription Thymus Thymus
16 chr1:227133600-227142600 Weak transcription Spleen Spleen
17 chr1:227134000-227141000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:227134000-227142400 Weak transcription Rectal Smooth Muscle rectum
19 chr1:227134400-227144800 Weak transcription Fetal Intestine Large intestine
20 chr1:227134400-227151800 Weak transcription Small Intestine intestine
21 chr1:227134400-227153000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr1:227134600-227150200 Weak transcription Duodenum Mucosa Duodenum
23 chr1:227134800-227142000 Weak transcription Primary T cells fromperipheralblood blood
24 chr1:227134800-227142400 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr1:227134800-227145000 Weak transcription Brain Substantia Nigra brain
26 chr1:227134800-227149000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr1:227134800-227150200 Weak transcription Brain Angular Gyrus brain
28 chr1:227135000-227141000 Weak transcription Stomach Smooth Muscle stomach
29 chr1:227135000-227150600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr1:227135200-227149800 Weak transcription Colon Smooth Muscle Colon
31 chr1:227135200-227152600 Weak transcription Colonic Mucosa Colon
32 chr1:227135200-227158000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:227135400-227146800 Weak transcription Stomach Mucosa stomach
34 chr1:227136200-227141000 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr1:227136200-227141200 Weak transcription Fetal Stomach stomach
36 chr1:227136200-227144800 Weak transcription Brain Hippocampus Middle brain
37 chr1:227136200-227145200 Weak transcription Brain Anterior Caudate brain
38 chr1:227136200-227152800 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:227136400-227146600 Weak transcription Primary B cells from peripheral blood blood
40 chr1:227136400-227149200 Weak transcription Brain Inferior Temporal Lobe brain
41 chr1:227137000-227146200 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:227137400-227150400 Weak transcription Aorta Aorta
43 chr1:227137800-227142800 Weak transcription Fetal Muscle Leg muscle
44 chr1:227137800-227146600 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr1:227138000-227142400 Enhancers Pancreas Pancrea
46 chr1:227138000-227149000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr1:227138000-227152000 Weak transcription Brain Cingulate Gyrus brain
48 chr1:227138200-227141200 Enhancers Skeletal Muscle Female skeletal muscle
49 chr1:227138400-227147800 Weak transcription Primary T cells from cord blood blood
50 chr1:227138800-227140800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015