The 2.0 version of rSNPBase

Variant report

Variant rs16851412
Chromosome Location chr3:141140659-141140660
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:141131600-141144400 Strong transcription Fetal Intestine Large intestine
2 chr3:141131600-141145200 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr3:141131800-141144600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr3:141131800-141161200 Weak transcription Thymus Thymus
5 chr3:141132200-141141000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr3:141132200-141144400 Strong transcription Fetal Intestine Small intestine
7 chr3:141132200-141144800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr3:141132200-141171000 Weak transcription Primary B cells from cord blood blood
9 chr3:141133800-141158400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr3:141133800-141158400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr3:141134000-141146800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr3:141134000-141161600 Weak transcription Fetal Brain Male brain
13 chr3:141134200-141145200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr3:141134200-141161600 Weak transcription Primary T cells from cord blood blood
15 chr3:141134600-141144400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr3:141134600-141144600 Weak transcription Liver Liver
17 chr3:141134600-141148000 Weak transcription Brain Germinal Matrix brain
18 chr3:141134800-141142200 Strong transcription Rectal Mucosa Donor 29 rectum
19 chr3:141135200-141144600 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr3:141135400-141144000 Weak transcription Fetal Kidney kidney
21 chr3:141135600-141160200 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr3:141136000-141144600 Weak transcription K562 blood
23 chr3:141136200-141140800 Weak transcription Fetal Brain Female brain
24 chr3:141136200-141144600 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr3:141136200-141144800 Weak transcription Colonic Mucosa Colon
26 chr3:141136400-141142000 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr3:141136400-141144400 Weak transcription Brain Cingulate Gyrus brain
28 chr3:141136400-141145000 Weak transcription Primary hematopoietic stem cells blood
29 chr3:141137400-141144400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr3:141137400-141144800 Weak transcription Stomach Mucosa stomach
31 chr3:141137600-141144400 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr3:141137600-141146400 Weak transcription Fetal Muscle Trunk muscle
33 chr3:141137800-141142400 Weak transcription HepG2 liver
34 chr3:141137800-141144800 Weak transcription HSMMtube muscle
35 chr3:141138000-141144400 Weak transcription Fetal Lung lung
36 chr3:141138000-141152000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr3:141138200-141144600 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr3:141138400-141142000 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr3:141138400-141144400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr3:141138400-141145200 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr3:141138600-141141000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr3:141138600-141142000 Weak transcription Primary B cells from peripheral blood blood
43 chr3:141138600-141142400 Strong transcription GM12878-XiMat blood
44 chr3:141138600-141144600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr3:141139000-141141000 Enhancers NHDF-Ad bronchial
46 chr3:141139000-141142000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr3:141139000-141144200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr3:141139000-141145000 Weak transcription Fetal Muscle Leg muscle
49 chr3:141139200-141140800 Weak transcription Aorta Aorta
50 chr3:141139200-141141000 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015