Variant report

Variant rs16858745
Chromosome Location chr3:111588064-111588065
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111579800-111588400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:111579800-111589000 Weak transcription Pancreas Pancrea
3 chr3:111580000-111589200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr3:111581400-111593800 Weak transcription Fetal Muscle Trunk muscle
5 chr3:111582200-111593200 Weak transcription Lung lung
6 chr3:111583800-111591200 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr3:111584400-111589200 Enhancers Colon Smooth Muscle Colon
8 chr3:111584400-111589800 Enhancers Rectal Smooth Muscle rectum
9 chr3:111584400-111591000 Weak transcription H9 Cell Line embryonic stem cell
10 chr3:111584600-111588400 Weak transcription Fetal Stomach stomach
11 chr3:111584600-111588400 Weak transcription HepG2 liver
12 chr3:111584600-111588400 Weak transcription NHDF-Ad bronchial
13 chr3:111584600-111588600 Weak transcription Fetal Lung lung
14 chr3:111584600-111588800 Weak transcription Stomach Mucosa stomach
15 chr3:111584600-111590800 Weak transcription Fetal Kidney kidney
16 chr3:111584600-111591000 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr3:111584600-111593200 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr3:111584600-111603400 Weak transcription Fetal Intestine Large intestine
19 chr3:111584800-111591200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr3:111585200-111588400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr3:111585200-111588400 Weak transcription HMEC breast
22 chr3:111585200-111589000 Weak transcription NHLF lung
23 chr3:111585200-111591200 Weak transcription H1 Cell Line embryonic stem cell
24 chr3:111585200-111591200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr3:111585200-111591200 Weak transcription Fetal Muscle Leg muscle
26 chr3:111585200-111591200 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr3:111585200-111622000 Weak transcription HSMMtube muscle
28 chr3:111585400-111588400 Weak transcription HUVEC blood vessel
29 chr3:111585400-111591000 Weak transcription Ovary ovary
30 chr3:111585400-111592800 Weak transcription HSMM muscle
31 chr3:111585400-111593400 Weak transcription Psoas Muscle Psoas
32 chr3:111585400-111603400 Weak transcription Spleen Spleen
33 chr3:111585400-111609000 Weak transcription Esophagus oesophagus
34 chr3:111585600-111589000 Enhancers Adipose Nuclei Adipose
35 chr3:111585600-111589800 Enhancers Stomach Smooth Muscle stomach
36 chr3:111585600-111591000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr3:111585600-111592400 Weak transcription Muscle Satellite Cultured Cells --
38 chr3:111585800-111589600 Weak transcription Small Intestine intestine
39 chr3:111586400-111593000 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr3:111586600-111588800 Weak transcription Brain Substantia Nigra brain
41 chr3:111586800-111588400 Enhancers A549 lung
42 chr3:111587000-111588400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr3:111587000-111589800 Genic enhancers NH-A brain
44 chr3:111587000-111590200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr3:111587000-111591200 Weak transcription Right Atrium heart
46 chr3:111587000-111591400 Enhancers Fetal Heart heart
47 chr3:111587000-111591600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
48 chr3:111587200-111588400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr3:111587200-111588400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr3:111587200-111588400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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