Variant report

Variant rs16859961
Chromosome Location chr3:112405162-112405163
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:112391400-112407800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr3:112397000-112406000 Weak transcription K562 blood
3 chr3:112397400-112405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr3:112400400-112408200 Enhancers NHLF lung
5 chr3:112400600-112406600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr3:112400600-112408800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
7 chr3:112401000-112408800 Enhancers Muscle Satellite Cultured Cells --
8 chr3:112401200-112405200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr3:112401200-112406000 Enhancers A549 lung
10 chr3:112401200-112413800 Weak transcription Colon Smooth Muscle Colon
11 chr3:112401400-112408200 Enhancers Osteobl bone
12 chr3:112401600-112407000 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr3:112401800-112407600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr3:112402600-112407800 Enhancers NHDF-Ad bronchial
15 chr3:112403000-112407400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
16 chr3:112403200-112407000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr3:112403200-112409200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr3:112403400-112406400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr3:112403400-112407000 Weak transcription HMEC breast
20 chr3:112403400-112407000 Weak transcription NHEK skin
21 chr3:112403400-112409200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
22 chr3:112403600-112409600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:112404000-112409400 Enhancers Placenta Amnion Placenta Amnion
24 chr3:112404200-112405400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr3:112404200-112408600 Weak transcription Primary T cells from cord blood blood
26 chr3:112404200-112408800 Enhancers NH-A brain
27 chr3:112404400-112406000 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr3:112404400-112406400 Enhancers HUES48 Cell Line embryonic stem cell
29 chr3:112404400-112406800 Enhancers HUES64 Cell Line embryonic stem cell
30 chr3:112404400-112408200 Enhancers HUES6 Cell Line embryonic stem cell
31 chr3:112404400-112408800 Enhancers ES-I3 Cell Line embryonic stem cell
32 chr3:112404600-112405200 Weak transcription H1 Cell Line embryonic stem cell
33 chr3:112404600-112405200 Weak transcription H9 Cell Line embryonic stem cell
34 chr3:112404600-112405200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr3:112404600-112406000 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr3:112404600-112406600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr3:112405000-112405400 Enhancers Fetal Muscle Leg muscle
38 chr3:112405000-112406000 Weak transcription HSMM muscle
39 chr3:112405000-112406400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr3:112405000-112406400 Enhancers iPS-20b Cell Line embryonic stem cell

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