Variant report

Variant	rs16864766
Chromosome Location	chr2:177822887-177822888
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1004651	1.00[CHD][hapmap]
rs10184742	1.00[CHD][hapmap]
rs10930769	1.00[ASN][1000 genomes]
rs11676030	1.00[ASN][1000 genomes]
rs11679607	1.00[CHD][hapmap]
rs16864480	1.00[CHD][hapmap]
rs16864744	1.00[ASN][1000 genomes]
rs17627353	1.00[ASN][1000 genomes]
rs4894220	1.00[ASN][1000 genomes]
rs4894221	1.00[ASN][1000 genomes]
rs6707630	1.00[ASN][1000 genomes]
rs6715148	1.00[ASN][1000 genomes]
rs6737247	1.00[ASN][1000 genomes]
rs73035099	1.00[ASN][1000 genomes]
rs7577255	1.00[ASN][1000 genomes]
rs7577987	1.00[CHD][hapmap]
rs7578081	1.00[CHD][hapmap]
rs7603168	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875449	chr2:177775612-177835010	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:177820800-177825400	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr2:177820800-177825400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr2:177822800-177827600	Enhancers	Brain Germinal Matrix	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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