The 2.0 version of rSNPBase

Variant report

Variant rs16867109
Chromosome Location chr2:180802108-180802109
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:180783800-180811800 Weak transcription Left Ventricle heart
2 chr2:180792000-180816400 Weak transcription Aorta Aorta
3 chr2:180792800-180808400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr2:180793200-180809400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr2:180794800-180810000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr2:180795400-180808000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr2:180795800-180807000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr2:180795800-180809400 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr2:180796000-180807400 Weak transcription Primary hematopoietic stem cells blood
10 chr2:180796000-180810600 Weak transcription Fetal Intestine Small intestine
11 chr2:180796200-180809200 Weak transcription Primary T cells fromperipheralblood blood
12 chr2:180796400-180803200 Weak transcription GM12878-XiMat blood
13 chr2:180796400-180808600 Weak transcription Primary B cells from peripheral blood blood
14 chr2:180796400-180809800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr2:180796400-180815000 Weak transcription Brain Cingulate Gyrus brain
16 chr2:180796600-180809800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr2:180796600-180810200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr2:180797000-180808400 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr2:180797000-180808800 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr2:180797000-180810600 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr2:180797000-180815800 Weak transcription Right Ventricle heart
22 chr2:180797200-180808800 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr2:180797400-180808600 Weak transcription HSMM muscle
24 chr2:180797400-180809600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr2:180797400-180815200 Weak transcription Colon Smooth Muscle Colon
26 chr2:180797600-180804400 Strong transcription Primary T cells from cord blood blood
27 chr2:180797800-180809800 Weak transcription Stomach Smooth Muscle stomach
28 chr2:180797800-180811400 Weak transcription Fetal Lung lung
29 chr2:180797800-180818200 Weak transcription Esophagus oesophagus
30 chr2:180798000-180807400 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr2:180798000-180808200 Weak transcription Primary monocytes fromperipheralblood blood
32 chr2:180798000-180809200 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr2:180798000-180809400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr2:180798000-180809800 Weak transcription Fetal Intestine Large intestine
35 chr2:180798000-180813800 Weak transcription Brain Angular Gyrus brain
36 chr2:180798000-180814200 Weak transcription Muscle Satellite Cultured Cells --
37 chr2:180798000-180816200 Weak transcription Pancreas Pancrea
38 chr2:180798200-180807400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr2:180798200-180815000 Weak transcription Brain Substantia Nigra brain
40 chr2:180798600-180807400 Weak transcription Adipose Nuclei Adipose
41 chr2:180798600-180816000 Weak transcription Fetal Heart heart
42 chr2:180799400-180809200 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr2:180799600-180813400 Weak transcription HMEC breast
44 chr2:180799800-180809200 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr2:180799800-180809800 Weak transcription Fetal Muscle Leg muscle
46 chr2:180800000-180812800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr2:180800200-180803000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr2:180800200-180808400 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr2:180800200-180808600 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr2:180800200-180808800 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015