Variant report

Variant rs16869489
Chromosome Location chr5:90422654-90422655
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:90396200-90422800 Weak transcription Esophagus oesophagus
2 chr5:90401600-90431800 Weak transcription K562 blood
3 chr5:90403000-90431600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr5:90403200-90431600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr5:90416000-90430000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr5:90418600-90435600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr5:90419000-90423200 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr5:90419200-90424000 Weak transcription Brain Cingulate Gyrus brain
9 chr5:90419600-90425000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr5:90419800-90431400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr5:90420600-90423200 Enhancers Adipose Nuclei Adipose
12 chr5:90420600-90425800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr5:90420600-90425800 Enhancers Colon Smooth Muscle Colon
14 chr5:90420800-90423400 Enhancers Right Atrium heart
15 chr5:90420800-90424600 Enhancers Pancreas Pancrea
16 chr5:90421000-90423800 Enhancers Fetal Brain Female brain
17 chr5:90421000-90425200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr5:90421000-90425400 Enhancers Rectal Smooth Muscle rectum
19 chr5:90421200-90425000 Enhancers Brain Anterior Caudate brain
20 chr5:90421400-90422800 Weak transcription Brain Angular Gyrus brain
21 chr5:90421400-90423600 Weak transcription Psoas Muscle Psoas
22 chr5:90421400-90425000 Enhancers NHLF lung
23 chr5:90421400-90425000 Enhancers Osteobl bone
24 chr5:90421600-90423200 Enhancers Brain Hippocampus Middle brain
25 chr5:90421600-90423200 Enhancers Placenta Amnion Placenta Amnion
26 chr5:90421600-90423800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr5:90421600-90424200 Enhancers Fetal Lung lung
28 chr5:90421600-90424600 Enhancers Hela-S3 cervix
29 chr5:90421600-90424800 Enhancers Muscle Satellite Cultured Cells --
30 chr5:90421600-90425200 Enhancers Duodenum Smooth Muscle Duodenum
31 chr5:90421600-90425800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr5:90421800-90423200 Enhancers Sigmoid Colon Sigmoid Colon
33 chr5:90421800-90423200 Enhancers Small Intestine intestine
34 chr5:90421800-90424000 Enhancers NH-A brain
35 chr5:90421800-90424600 Enhancers Stomach Mucosa stomach
36 chr5:90421800-90425200 Enhancers NHDF-Ad bronchial
37 chr5:90421800-90425400 Enhancers Cortex derived primary cultured neurospheres brain
38 chr5:90421800-90425400 Enhancers Fetal Stomach stomach
39 chr5:90421800-90425600 Enhancers A549 lung
40 chr5:90422000-90422800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
41 chr5:90422000-90423800 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr5:90422200-90422800 Enhancers Fetal Kidney kidney
43 chr5:90422200-90422800 Enhancers HMEC breast
44 chr5:90422200-90423200 Enhancers Fetal Adrenal Gland Adrenal Gland
45 chr5:90422200-90423800 Enhancers HepG2 liver
46 chr5:90422200-90424000 Enhancers Fetal Muscle Leg muscle
47 chr5:90422200-90424400 Enhancers Rectal Mucosa Donor 29 rectum
48 chr5:90422200-90424600 Enhancers Ovary ovary
49 chr5:90422200-90425400 Enhancers Rectal Mucosa Donor 31 rectum
50 chr5:90422400-90422800 Enhancers Stomach Smooth Muscle stomach

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