The 2.0 version of rSNPBase

Variant report

Variant rs16872289
Chromosome Location chr5:74098521-74098522
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:74064000-74112400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:74064200-74102000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr5:74064400-74134600 Weak transcription Fetal Brain Male brain
4 chr5:74064800-74101200 Strong transcription iPS-20b Cell Line embryonic stem cell
5 chr5:74066600-74112800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr5:74069000-74153000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr5:74069600-74102600 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr5:74070000-74111600 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr5:74074200-74102600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr5:74074800-74102200 Weak transcription Primary B cells from peripheral blood blood
11 chr5:74074800-74143400 Weak transcription Primary B cells from cord blood blood
12 chr5:74081200-74101200 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr5:74081200-74101200 Strong transcription iPS-18 Cell Line embryonic stem cell
14 chr5:74081400-74101400 Strong transcription HUES6 Cell Line embryonic stem cell
15 chr5:74081600-74098600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr5:74081800-74101200 Strong transcription HUES48 Cell Line embryonic stem cell
17 chr5:74087600-74112000 Weak transcription A549 lung
18 chr5:74087600-74130000 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr5:74088800-74101200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr5:74090800-74099200 Strong transcription HepG2 liver
21 chr5:74095800-74146000 Weak transcription Primary hematopoietic stem cells blood
22 chr5:74096000-74100000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr5:74096000-74100400 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr5:74096000-74100600 Weak transcription Brain Anterior Caudate brain
25 chr5:74096000-74102400 Weak transcription Ovary ovary
26 chr5:74096000-74103000 Weak transcription Thymus Thymus
27 chr5:74096000-74106600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr5:74096000-74112400 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr5:74096000-74113400 Weak transcription Brain Angular Gyrus brain
30 chr5:74096000-74131000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr5:74096000-74134200 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr5:74096000-74134200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr5:74096000-74137200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr5:74096000-74137200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr5:74096200-74134200 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr5:74096400-74098600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr5:74096400-74100200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr5:74096400-74109200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr5:74096400-74111400 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr5:74096400-74111400 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr5:74096400-74129600 Weak transcription Primary T cells fromperipheralblood blood
42 chr5:74096400-74133800 Weak transcription Fetal Thymus thymus
43 chr5:74096800-74098600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr5:74097000-74098600 Enhancers NHDF-Ad bronchial
45 chr5:74097200-74098600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
46 chr5:74097400-74147400 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr5:74097600-74098600 Enhancers NHEK skin
48 chr5:74097600-74098800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr5:74097800-74100000 Weak transcription H1 Cell Line embryonic stem cell
50 chr5:74097800-74100400 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015