The 2.0 version of rSNPBase

Variant report

Variant rs6870609
Chromosome Location chr5:74002403-74002404
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:73982000-74017400 Weak transcription Placenta Amnion Placenta Amnion
2 chr5:73982000-74061800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:73982200-74020600 Weak transcription Fetal Brain Male brain
4 chr5:73983000-74017400 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr5:73983000-74027000 Weak transcription Fetal Heart heart
6 chr5:73983200-74030200 Weak transcription Small Intestine intestine
7 chr5:73983400-74016000 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr5:73984600-74002600 Strong transcription Primary neutrophils fromperipheralblood blood
9 chr5:73985000-74002600 Strong transcription Duodenum Mucosa Duodenum
10 chr5:73985200-74002600 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr5:73987200-74017400 Weak transcription Fetal Kidney kidney
12 chr5:73987600-74014800 Weak transcription Fetal Lung lung
13 chr5:73988400-74021000 Weak transcription Right Ventricle heart
14 chr5:73989800-74002600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr5:73990000-74016200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr5:73990400-74013600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr5:73993400-74014400 Weak transcription Stomach Mucosa stomach
18 chr5:73993400-74017400 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr5:73993800-74014600 Weak transcription Brain Cingulate Gyrus brain
20 chr5:73993800-74014600 Weak transcription HSMMtube muscle
21 chr5:73993800-74019800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr5:73995000-74009800 Weak transcription HMEC breast
23 chr5:73996800-74002600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr5:73997600-74002600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr5:73997600-74002600 Strong transcription Adipose Nuclei Adipose
26 chr5:73998200-74002600 Strong transcription Primary B cells from peripheral blood blood
27 chr5:73998200-74002600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr5:73998200-74002600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr5:73998200-74002600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr5:73998200-74002600 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr5:73998200-74002600 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr5:73998400-74002600 Strong transcription Primary T cells fromperipheralblood blood
33 chr5:73998400-74002600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr5:73998400-74002600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr5:73998400-74002600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
36 chr5:73998800-74013800 Weak transcription Muscle Satellite Cultured Cells --
37 chr5:73999000-74002600 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
38 chr5:73999000-74002600 Strong transcription Colonic Mucosa Colon
39 chr5:73999000-74002600 Strong transcription Left Ventricle heart
40 chr5:73999400-74002600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr5:73999600-74014600 Weak transcription Rectal Smooth Muscle rectum
42 chr5:73999600-74015000 Weak transcription HepG2 liver
43 chr5:73999600-74016000 Weak transcription Fetal Muscle Leg muscle
44 chr5:73999800-74010200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr5:73999800-74014200 Weak transcription Brain Hippocampus Middle brain
46 chr5:73999800-74014200 Weak transcription Fetal Muscle Trunk muscle
47 chr5:73999800-74014800 Weak transcription NHLF lung
48 chr5:73999800-74016000 Weak transcription Thymus Thymus
49 chr5:73999800-74017600 Weak transcription Aorta Aorta
50 chr5:73999800-74060800 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015