Variant report

Variant	rs16872376
Chromosome Location	chr8:106108258-106108259
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs16872273	1.00[AMR][1000 genomes]
rs16872274	1.00[AMR][1000 genomes]
rs16872275	1.00[AMR][1000 genomes]
rs16872382	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs285844	1.00[YRI][hapmap]
rs285875	1.00[YRI][hapmap]
rs58805155	1.00[AMR][1000 genomes]
rs6980906	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762763	chr8:105943295-106218634	Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv891253	chr8:105994885-106251476	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv891254	chr8:106060970-106175867	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv465755	chr8:106107997-106121745	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:106105400-106109800	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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