Variant report

Variant rs16877613
Chromosome Location chr5:79518200-79518201
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79498600-79520800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr5:79498600-79521200 Weak transcription Placenta Amnion Placenta Amnion
3 chr5:79500000-79537600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
4 chr5:79509600-79525600 Weak transcription Spleen Spleen
5 chr5:79509800-79535600 Weak transcription Primary B cells from cord blood blood
6 chr5:79511000-79518200 Enhancers Primary hematopoietic stem cells short term culture blood
7 chr5:79512000-79534000 Weak transcription Primary monocytes fromperipheralblood blood
8 chr5:79513400-79519600 Weak transcription HMEC breast
9 chr5:79513600-79518200 Enhancers Brain Hippocampus Middle brain
10 chr5:79513600-79525400 Weak transcription Adipose Nuclei Adipose
11 chr5:79513800-79525200 Weak transcription Osteobl bone
12 chr5:79513800-79527800 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr5:79514000-79524200 Weak transcription H9 Cell Line embryonic stem cell
14 chr5:79514200-79520000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr5:79514200-79525600 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr5:79515000-79518400 Genic enhancers Primary T cells from cord blood blood
17 chr5:79515400-79518800 Genic enhancers Primary T helper cells fromperipheralblood blood
18 chr5:79515400-79525200 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr5:79515400-79525800 Weak transcription Esophagus oesophagus
20 chr5:79515600-79521200 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr5:79515600-79525400 Weak transcription H1 Cell Line embryonic stem cell
22 chr5:79515600-79525400 Weak transcription Rectal Smooth Muscle rectum
23 chr5:79515600-79525600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr5:79515600-79525600 Weak transcription Ovary ovary
25 chr5:79515600-79525600 Weak transcription Right Atrium heart
26 chr5:79515600-79534400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr5:79515800-79525400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr5:79515800-79527000 Weak transcription Stomach Smooth Muscle stomach
29 chr5:79516000-79519000 Genic enhancers Primary T cells fromperipheralblood blood
30 chr5:79516600-79526400 Weak transcription Small Intestine intestine
31 chr5:79516800-79518200 Enhancers Liver Liver
32 chr5:79516800-79518600 Enhancers Primary T helper cells PMA-I stimulated --
33 chr5:79516800-79519800 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr5:79516800-79521200 Weak transcription Brain Substantia Nigra brain
35 chr5:79516800-79521200 Weak transcription Pancreas Pancrea
36 chr5:79516800-79523000 Weak transcription HepG2 liver
37 chr5:79516800-79524200 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr5:79516800-79525200 Weak transcription Fetal Lung lung
39 chr5:79516800-79525600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr5:79516800-79525600 Weak transcription Brain Angular Gyrus brain
41 chr5:79516800-79525600 Weak transcription Colonic Mucosa Colon
42 chr5:79516800-79525600 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr5:79516800-79534400 Weak transcription Right Ventricle heart
44 chr5:79517000-79518400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr5:79517000-79519200 Enhancers Brain Germinal Matrix brain
46 chr5:79517000-79519200 Strong transcription Fetal Intestine Small intestine
47 chr5:79517000-79519600 Enhancers Primary T helper 17 cells PMA-I stimulated --
48 chr5:79517000-79520200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr5:79517000-79521200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr5:79517000-79521200 Weak transcription Stomach Mucosa stomach

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