Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:26522451..26525005-chr4:26526111..26528805,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11933322	1.00[EUR][1000 genomes]
rs12054535	1.00[EUR][1000 genomes]
rs166353	0.85[JPT][hapmap]
rs16878448	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16878474	1.00[EUR][1000 genomes]
rs1800856	1.00[EUR][1000 genomes]
rs1994551	1.00[EUR][1000 genomes]
rs2309411	1.00[EUR][1000 genomes]
rs28678865	1.00[EUR][1000 genomes]
rs3113012	1.00[CHB][hapmap]
rs5011135	1.00[CHB][hapmap]
rs56672477	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58796261	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59744623	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60433687	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6822462	1.00[EUR][1000 genomes]
rs6856499	1.00[EUR][1000 genomes]
rs73112740	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73112752	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73114606	1.00[EUR][1000 genomes]
rs73114608	1.00[EUR][1000 genomes]
rs73810755	1.00[EUR][1000 genomes]
rs73810793	1.00[EUR][1000 genomes]
rs73810795	1.00[EUR][1000 genomes]
rs73810797	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762417	chr4:26491768-26576800	Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv2461473	chr4:26527455-26528878	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3362190	chr4:26527504-26529602	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26523200-26530800	Weak transcription	Colon Smooth Muscle	Colon
2	chr4:26523800-26527800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:26523800-26527800	Enhancers	HSMMtube	muscle
4	chr4:26523800-26528000	Enhancers	Muscle Satellite Cultured Cells	--
5	chr4:26524400-26527800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr4:26525600-26527800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr4:26526000-26528000	Enhancers	NHDF-Ad	bronchial
8	chr4:26526600-26527800	Enhancers	HSMM	muscle
9	chr4:26526600-26527800	Enhancers	NHLF	lung
10	chr4:26526800-26527800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr4:26526800-26527800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr4:26526800-26527800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr4:26526800-26527800	Enhancers	NH-A	brain
14	chr4:26526800-26527800	Enhancers	Osteobl	bone
15	chr4:26527200-26527800	Enhancers	HMEC	breast

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