The 2.0 version of rSNPBase

Variant report

Variant rs16897320
Chromosome Location chr8:100398222-100398223
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100367800-100403800 Weak transcription Ovary ovary
2 chr8:100379800-100403800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr8:100384400-100437600 Weak transcription Lung lung
4 chr8:100385800-100403600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr8:100386000-100428800 Weak transcription Esophagus oesophagus
6 chr8:100386800-100408400 Weak transcription Small Intestine intestine
7 chr8:100387400-100403800 Weak transcription Left Ventricle heart
8 chr8:100388400-100398800 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr8:100389800-100418800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr8:100390000-100403800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr8:100390000-100405600 Weak transcription Colon Smooth Muscle Colon
12 chr8:100390000-100405800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr8:100390000-100405800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr8:100390000-100421200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr8:100390200-100414000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr8:100390200-100415800 Weak transcription Muscle Satellite Cultured Cells --
17 chr8:100390400-100421200 Weak transcription Aorta Aorta
18 chr8:100391000-100428000 Weak transcription Pancreas Pancrea
19 chr8:100391400-100399000 Weak transcription Thymus Thymus
20 chr8:100391400-100403800 Weak transcription Fetal Lung lung
21 chr8:100391400-100405800 Weak transcription Gastric stomach
22 chr8:100391400-100419800 Weak transcription Fetal Muscle Trunk muscle
23 chr8:100391400-100430200 Weak transcription Brain Angular Gyrus brain
24 chr8:100391600-100399000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr8:100392400-100403800 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr8:100393600-100445200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr8:100393800-100399000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr8:100393800-100403800 Weak transcription Liver Liver
29 chr8:100393800-100419000 Weak transcription Fetal Kidney kidney
30 chr8:100394000-100420000 Weak transcription Fetal Intestine Small intestine
31 chr8:100394000-100420200 Weak transcription Fetal Intestine Large intestine
32 chr8:100394200-100403000 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr8:100394400-100403600 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr8:100394400-100403600 Weak transcription Primary hematopoietic stem cells blood
35 chr8:100394400-100415800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr8:100394600-100403800 Weak transcription GM12878-XiMat blood
37 chr8:100394600-100407000 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr8:100394600-100416000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr8:100394600-100417400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr8:100394600-100419000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr8:100395200-100403800 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr8:100395400-100407200 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr8:100395400-100409800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr8:100395400-100412400 Weak transcription Fetal Stomach stomach
45 chr8:100395400-100416200 Weak transcription Fetal Muscle Leg muscle
46 chr8:100395400-100420200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr8:100395400-100432600 Weak transcription Psoas Muscle Psoas
48 chr8:100395600-100403800 Weak transcription NHDF-Ad bronchial
49 chr8:100395600-100421000 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr8:100395800-100402800 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015