Variant report

Variant	rs16900656
Chromosome Location	chr8:126514567-126514568
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:126506743..126511658-chr8:126513008..126519867,6	MCF-7	breast:
2	chr8:126512692..126514676-chr8:126526124..126528188,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11996862	1.00[AMR][1000 genomes]
rs35116772	1.00[AMR][1000 genomes]
rs7813932	1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891437	chr8:126470817-126629328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126509400-126518200	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr8:126510400-126521200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr8:126510600-126514800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr8:126510800-126516000	Weak transcription	Lung	lung
5	chr8:126511400-126521400	Weak transcription	Hela-S3	cervix
6	chr8:126511400-126522000	Weak transcription	Fetal Lung	lung
7	chr8:126511600-126515600	Weak transcription	Fetal Intestine Small	intestine
8	chr8:126511600-126515600	Weak transcription	Left Ventricle	heart
9	chr8:126511600-126516000	Weak transcription	Right Atrium	heart
10	chr8:126511600-126516200	Weak transcription	Fetal Kidney	kidney
11	chr8:126511800-126515400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr8:126511800-126516000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
13	chr8:126511800-126516000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr8:126511800-126517200	Weak transcription	Primary monocytes fromperipheralblood	blood
15	chr8:126511800-126524000	Weak transcription	Brain Hippocampus Middle	brain
16	chr8:126512000-126515200	Weak transcription	Fetal Muscle Leg	muscle
17	chr8:126512000-126515600	Weak transcription	Psoas Muscle	Psoas
18	chr8:126512000-126515800	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr8:126512000-126516200	Weak transcription	Primary neutrophils fromperipheralblood	blood
20	chr8:126512200-126517800	Weak transcription	Spleen	Spleen
21	chr8:126512200-126518000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr8:126512600-126515600	Weak transcription	Skeletal Muscle Male	skeletal muscle
23	chr8:126512800-126525000	Weak transcription	Esophagus	oesophagus
24	chr8:126513800-126514600	Enhancers	A549	lung
25	chr8:126513800-126514800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr8:126513800-126514800	Enhancers	Adipose Nuclei	Adipose
27	chr8:126513800-126514800	Enhancers	HMEC	breast
28	chr8:126513800-126516000	Enhancers	Placenta	Placenta
29	chr8:126514000-126514600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr8:126514000-126514600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr8:126514000-126514600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
32	chr8:126514000-126514600	Flanking Active TSS	HepG2	liver
33	chr8:126514200-126514600	Enhancers	NH-A	brain
34	chr8:126514400-126514600	Enhancers	Liver	Liver
35	chr8:126514400-126518000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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