Variant report

Variant	rs35116772
Chromosome Location	chr8:126524248-126524249
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:126519998..126523591-chr8:126523937..126526687,3	MCF-7	breast:
2	chr8:126511075..126514085-chr8:126521842..126525722,3	MCF-7	breast:
3	chr8:126523824..126525644-chr8:126527668..126529840,2	MCF-7	breast:
4	chr8:126182429..126184249-chr8:126522972..126525365,2	K562	blood:
5	chr8:126462918..126464669-chr8:126522806..126525231,2	MCF-7	breast:
6	chr8:126519872..126521908-chr8:126523725..126526407,2	K562	blood:
7	chr8:126517122..126519664-chr8:126522287..126525132,2	MCF-7	breast:
8	chr8:126524197..126526991-chr8:126702138..126703710,2	K562	blood:
9	chr8:126440271..126444147-chr8:126523927..126527382,5	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000173334	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11996862	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16900656	1.00[AMR][1000 genomes]
rs7813932	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891437	chr8:126470817-126629328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:65 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126512800-126525000	Weak transcription	Esophagus	oesophagus
2	chr8:126516400-126525000	Weak transcription	Psoas Muscle	Psoas
3	chr8:126517200-126529000	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr8:126517600-126528000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr8:126518000-126534400	Weak transcription	Right Atrium	heart
6	chr8:126518400-126524400	Weak transcription	Rectal Mucosa Donor 29	rectum
7	chr8:126518600-126528800	Weak transcription	Right Ventricle	heart
8	chr8:126518600-126529400	Enhancers	Primary T cells fromperipheralblood	blood
9	chr8:126519000-126524800	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr8:126519200-126524800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr8:126519400-126524400	Enhancers	Monocytes-CD14+_RO01746	blood
12	chr8:126519800-126524600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr8:126520400-126524600	Weak transcription	Primary hematopoietic stem cells	blood
14	chr8:126521000-126525000	Weak transcription	Gastric	stomach
15	chr8:126521200-126524800	Weak transcription	Primary B cells from peripheral blood	blood
16	chr8:126521200-126525000	Enhancers	Adipose Nuclei	Adipose
17	chr8:126521400-126525000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
18	chr8:126521800-126526600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
19	chr8:126522200-126524600	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr8:126522200-126524800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr8:126522200-126525200	Weak transcription	Primary T helper cells fromperipheralblood	blood
22	chr8:126522200-126525200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
23	chr8:126522400-126524600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr8:126522400-126525200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
25	chr8:126522400-126526800	Enhancers	Spleen	Spleen
26	chr8:126522600-126524400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
27	chr8:126522600-126524600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr8:126522600-126524600	Weak transcription	Muscle Satellite Cultured Cells	--
29	chr8:126522600-126524600	Weak transcription	Fetal Lung	lung
30	chr8:126522600-126524600	Enhancers	HepG2	liver
31	chr8:126522600-126524800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
32	chr8:126522600-126524800	Weak transcription	Osteobl	bone
33	chr8:126522600-126525000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr8:126522600-126528800	Weak transcription	Brain Cingulate Gyrus	brain
35	chr8:126522800-126524400	Weak transcription	NHEK	skin
36	chr8:126522800-126524600	Weak transcription	NH-A	brain
37	chr8:126522800-126525000	Weak transcription	HUVEC	blood vessel
38	chr8:126522800-126525200	Weak transcription	Primary T helper cells PMA-I stimulated	--
39	chr8:126522800-126525400	Weak transcription	Lung	lung
40	chr8:126523200-126526200	Enhancers	Placenta	Placenta
41	chr8:126523400-126524600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
42	chr8:126523400-126524600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
43	chr8:126523400-126524800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
44	chr8:126523400-126525200	Enhancers	Skeletal Muscle Male	skeletal muscle
45	chr8:126523600-126524600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
46	chr8:126523600-126524800	Weak transcription	Fetal Muscle Leg	muscle
47	chr8:126523600-126525600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
48	chr8:126523800-126524800	Weak transcription	Primary B cells from cord blood	blood
49	chr8:126524000-126524400	Enhancers	Brain Hippocampus Middle	brain
50	chr8:126524000-126524400	Weak transcription	GM12878-XiMat	blood

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