Variant report

Variant	rs16904016
Chromosome Location	chr8:91177627-91177628
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:91177198..91178801-chr8:91185940..91187719,2	MCF-7	breast:
2	chr8:91176914..91178549-chr8:91234676..91237074,2	K562	blood:
3	chr8:91175219..91178633-chr8:91184019..91187268,3	K562	blood:
4	chr8:91177407..91179281-chr8:91196128..91199121,2	MCF-7	breast:
5	chr8:91177486..91179176-chr8:91180628..91182984,2	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12675530	1.00[CEU][hapmap];0.83[JPT][hapmap]
rs16901941	1.00[AFR][1000 genomes]
rs16903927	1.00[AFR][1000 genomes]
rs16904011	1.00[AFR][1000 genomes]
rs16904073	1.00[CEU][hapmap]
rs1805811	1.00[AFR][1000 genomes]
rs1805850	1.00[AFR][1000 genomes]
rs1805894	1.00[CEU][hapmap]
rs1805901	1.00[CEU][hapmap]
rs1805902	1.00[CEU][hapmap]
rs1805907	1.00[CEU][hapmap]
rs1805911	1.00[CEU][hapmap]
rs1805912	1.00[CEU][hapmap]
rs1805914	1.00[CEU][hapmap]
rs1805915	1.00[CEU][hapmap]
rs2280779	1.00[AFR][1000 genomes]
rs3026287	1.00[CEU][hapmap]
rs6982611	1.00[AFR][1000 genomes]
rs6983881	1.00[EUR][1000 genomes]
rs6997558	1.00[AFR][1000 genomes]
rs7001425	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	esv2757281	chr8:91090821-91235335	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	esv34347	chr8:91101339-91179126	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
5	nsv470225	chr8:91113616-91229254	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
6	nsv891184	chr8:91114698-91222654	Active TSS Genic enhancers Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
7	esv35109	chr8:91150726-91226940	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
8	nsv818643	chr8:91153308-91212148	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91175800-91178800	Enhancers	Fetal Intestine Large	intestine
2	chr8:91176200-91177800	Enhancers	HepG2	liver
3	chr8:91176400-91178000	Enhancers	Fetal Heart	heart
4	chr8:91176400-91178600	Enhancers	Fetal Intestine Small	intestine
5	chr8:91176800-91178200	Enhancers	Left Ventricle	heart
6	chr8:91176800-91180600	Enhancers	Ovary	ovary
7	chr8:91177000-91187000	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr8:91177400-91177800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr8:91177400-91177800	Flanking Active TSS	K562	blood
10	chr8:91177400-91178200	Enhancers	Right Ventricle	heart

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