Variant report

Variant	rs16904101
Chromosome Location	chr8:130524638-130524639
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:130520024..130525389-chr8:130526059..130531772,7	K562	blood:
2	chr8:130511733..130514870-chr8:130523841..130528014,4	K562	blood:
3	chr8:130522350..130525139-chr8:130526258..130530480,3	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10111801	0.82[CEU][hapmap];0.82[JPT][hapmap]
rs12676467	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs16904089	0.85[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs16904092	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2894474	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs73393994	0.89[AFR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130521200-130526600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr8:130521400-130526200	Weak transcription	NH-A	brain
3	chr8:130521400-130526400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr8:130521400-130526400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr8:130521400-130526400	Weak transcription	HSMM	muscle
6	chr8:130521400-130526400	Weak transcription	Osteobl	bone
7	chr8:130521400-130526600	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr8:130522200-130526000	Weak transcription	NHEK	skin
9	chr8:130522200-130526200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr8:130522400-130526200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr8:130523000-130526000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr8:130523000-130526200	Weak transcription	HMEC	breast
13	chr8:130523800-130527000	Enhancers	Fetal Intestine Small	intestine
14	chr8:130523800-130528000	Enhancers	Fetal Intestine Large	intestine
15	chr8:130524200-130526200	Weak transcription	Fetal Heart	heart
16	chr8:130524200-130526400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr8:130524200-130527600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr8:130524600-130525600	Weak transcription	HUES64 Cell Line	embryonic stem cell
19	chr8:130524600-130526200	Strong transcription	K562	blood
20	chr8:130524600-130526400	Weak transcription	Dnd41	blood

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