Variant report

Variant	rs2894474
Chromosome Location	chr8:130502983-130502984
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10111801	0.82[JPT][hapmap]
rs12676467	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs16904089	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16904092	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16904101	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs73391892	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73391902	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73393962	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130490200-130503400	Weak transcription	Dnd41	blood
2	chr8:130497200-130504200	Weak transcription	Thymus	Thymus
3	chr8:130497600-130503600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:130500800-130503400	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr8:130502400-130503600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr8:130502400-130504600	Enhancers	HMEC	breast
7	chr8:130502600-130503200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr8:130502600-130503400	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr8:130502600-130503600	Enhancers	NH-A	brain
10	chr8:130502600-130504200	Enhancers	NHEK	skin
11	chr8:130502600-130504400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr8:130502800-130503400	Enhancers	Osteobl	bone
13	chr8:130502800-130503600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr8:130502800-130504400	Genic enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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