Variant report

Variant	rs16904545
Chromosome Location	chr8:91445637-91445638
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10086788	0.89[EUR][1000 genomes]
rs10087100	0.96[EUR][1000 genomes]
rs10099647	0.89[EUR][1000 genomes]
rs10100832	0.81[EUR][1000 genomes]
rs10100923	0.92[EUR][1000 genomes]
rs10103125	0.89[EUR][1000 genomes]
rs10103138	1.00[EUR][1000 genomes]
rs10103492	1.00[CEU][hapmap]
rs10104445	0.96[EUR][1000 genomes]
rs10104451	0.89[EUR][1000 genomes]
rs10106274	0.96[EUR][1000 genomes]
rs10111531	0.89[EUR][1000 genomes]
rs10112375	0.96[EUR][1000 genomes]
rs10112676	0.89[EUR][1000 genomes]
rs10156381	0.87[EUR][1000 genomes]
rs1015844	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10216873	0.89[EUR][1000 genomes]
rs11995911	1.00[CEU][hapmap]
rs11996705	1.00[CEU][hapmap]
rs11997568	0.83[EUR][1000 genomes]
rs13439871	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs16904875	1.00[CEU][hapmap]
rs16904876	1.00[CEU][hapmap]
rs28385552	0.92[EUR][1000 genomes]
rs28550265	0.96[EUR][1000 genomes]
rs28610968	0.87[EUR][1000 genomes]
rs28684622	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs28882092	0.96[EUR][1000 genomes]
rs4474067	0.83[EUR][1000 genomes]
rs4570116	1.00[CEU][hapmap]
rs5005584	1.00[CEU][hapmap]
rs58836045	0.89[EUR][1000 genomes]
rs9297838	0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3413614	chr8:91444326-91448524	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91441000-91445800	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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