Variant report

Variant rs16919782
Chromosome Location chr8:55063437-55063438
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:55048600-55065600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr8:55048600-55066200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr8:55049000-55065800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr8:55049200-55063800 Strong transcription HUES48 Cell Line embryonic stem cell
5 chr8:55049200-55063800 Strong transcription Rectal Mucosa Donor 31 rectum
6 chr8:55049200-55064000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr8:55049200-55064000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr8:55049200-55064000 Strong transcription iPS-20b Cell Line embryonic stem cell
9 chr8:55049200-55064000 Strong transcription Fetal Intestine Large intestine
10 chr8:55049200-55064200 Strong transcription Fetal Muscle Trunk muscle
11 chr8:55049200-55064600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr8:55049400-55063600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr8:55049400-55063800 Strong transcription Fetal Adrenal Gland Adrenal Gland
14 chr8:55049400-55064000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr8:55049400-55064000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr8:55049400-55064000 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr8:55049400-55064600 Strong transcription HUES64 Cell Line embryonic stem cell
18 chr8:55049600-55064000 Strong transcription Adipose Nuclei Adipose
19 chr8:55049800-55063600 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr8:55049800-55064000 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr8:55050000-55063800 Strong transcription Duodenum Mucosa Duodenum
22 chr8:55050600-55063800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
23 chr8:55052600-55065600 Weak transcription Fetal Heart heart
24 chr8:55053600-55063800 Strong transcription Skeletal Muscle Female skeletal muscle
25 chr8:55053600-55064000 Strong transcription Fetal Thymus thymus
26 chr8:55054600-55064800 Strong transcription Fetal Intestine Small intestine
27 chr8:55054800-55063800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr8:55055000-55063800 Strong transcription H1 Cell Line embryonic stem cell
29 chr8:55055000-55064000 Strong transcription Primary T cells from cord blood blood
30 chr8:55055000-55064000 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr8:55055000-55064000 Strong transcription Skeletal Muscle Male skeletal muscle
32 chr8:55055200-55063600 Strong transcription Brain Hippocampus Middle brain
33 chr8:55055200-55063800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr8:55055200-55063800 Strong transcription Fetal Brain Female brain
35 chr8:55055200-55064000 Strong transcription Duodenum Smooth Muscle Duodenum
36 chr8:55055200-55064000 Strong transcription Sigmoid Colon Sigmoid Colon
37 chr8:55055200-55064000 Strong transcription HSMM muscle
38 chr8:55055200-55064600 Strong transcription Fetal Muscle Leg muscle
39 chr8:55055400-55063600 Strong transcription Left Ventricle heart
40 chr8:55055400-55064000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr8:55055400-55064400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr8:55055400-55064400 Strong transcription Brain Germinal Matrix brain
43 chr8:55056600-55063800 Strong transcription Dnd41 blood
44 chr8:55056800-55065600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr8:55057400-55064200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr8:55057800-55066200 Weak transcription Colonic Mucosa Colon
47 chr8:55058800-55065800 Weak transcription Small Intestine intestine
48 chr8:55058800-55066200 Weak transcription Psoas Muscle Psoas
49 chr8:55059000-55064000 Strong transcription Liver Liver
50 chr8:55059600-55063800 Strong transcription GM12878-XiMat blood

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